| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3077 |
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| Symbol | |
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| ID | 6410748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3322779 |
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| End bp | 3323312 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642712957 |
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| Product | glycoside hydrolase family 24 |
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| Protein accession | YP_001992058 |
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| Protein GI | 192291453 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.154512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCCG TCACGAAACG CAAAGTTGCA GGCCTGTCGG CCGCGGGCGC TATGTTCGCA
GCGATCCTGT TCGGCCATTG GGAAGGGATG AGCCTTGTTG CTCGCCACCT TCCATTTGAT
CCGCCCGGCG TAATCACCGT CTGCGGCGGG ATCACGAACT ACGACTGGCC TTGGCTCAAG
GTCGGCATGA AGTTCACAGA GCACGAATGC ATCAAGGCGC AGGCCGACGC GATGCAACGC
TACGGCGCCC AGGTTGCGGC TTGCGTTCCG GGGCTCGCCG ATATGCCGCC GCATCGGCAA
GCCGCGTTGG CTTCCTTCGC CGGCAACCTC GGTGCCGGCA AGATCTGCAA TCGCACGGAT
CGCTACAAGC GCAACCCATC CATCGCCGAA AACCTGAATG CCGGGCGGGT TCGGGAGGCC
TGCGACGCGA TGGTCAAGTT CGTCTATGCG AATGGCACCT TCCTGCAGGG TCTTCTCAAC
CGTCGCACTG ACGCGATGTG GGGCGAGCGG CCCTGGTGCT TACGGGAGGA CTGA
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| Protein sequence | MAAVTKRKVA GLSAAGAMFA AILFGHWEGM SLVARHLPFD PPGVITVCGG ITNYDWPWLK
VGMKFTEHEC IKAQADAMQR YGAQVAACVP GLADMPPHRQ AALASFAGNL GAGKICNRTD
RYKRNPSIAE NLNAGRVREA CDAMVKFVYA NGTFLQGLLN RRTDAMWGER PWCLRED
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