| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2978 |
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| Symbol | |
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| ID | 6410648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3247245 |
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| End bp | 3249506 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642712859 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_001991961 |
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| Protein GI | 192291356 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.510766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAAAA GATTGATTCC GCCGGAGCCG GCCGAGATCC ACGAGGTCCA GCTTCGCGAA
GCGCTGGAAG AGCGCTATCT CGCTTACGCG CTGTCGACCA TCATGCACCG GGCGCTGCCG
GACGCACGCG ACGGCCTCAA GCCGGTGCAT CGCCGCATCT TGTACGGGAT GCGATTGCTG
CGGCTCGACC CCGGCACGCC GTTCAAGAAG TCCGCCAAGA TCGTCGGCGA CGTGATGGGT
TCGTTCCACC CGCACGGCGA CCAGTCGATC TACGATGCGC TGGTGCGCCT CGCGCAGGAC
TTCTCGTCGC GCTATCCGCT GGTCGACGGC CAGGGCAATT TCGGCAACAT CGACGGCGAT
AACCCGGCGG CCTACCGCTA CACCGAAGCG CGCATGACCG ACGTCGCGCG GCTGCTGCTG
GATGGCATCG ACGAGGACGG CGTCGCGTTC CGCGCCAACT ACGACGGTCA GTCGAAAGAG
CCGGTCGTGC TGCCCGGCGG CTTTCCGAAC CTGCTCGCCA ACGGCGCGCA GGGCATCGCC
GTCGGCATGG CCACCGCGAT CCCACCGCAC AACGCCGCCG AGCTGTGTGA TGCCGCGCTG
CATCTGATCG AGAAGCCCGA CGCCAAGTCG AAGGCGCTGC TGCGCTTCGT CAAGGGGCCG
GACTTCCCGA CCGGCGGCAT CATCATCGAC TCCAAGGAAA GCATCGCGGA GGCCTACACC
ACCGGCCGCG GCGCGTTCCG CACCCGCGCC AAGTGGGAGC AGGAAGAGGG CGCGCGCGGC
ACCTGGACGG TGGTGGTCAC GCAGATCCCG TGGCTGGTGC AGAAGTCGCG GCTGATCGAG
AAGATCGCCG AGCTGCTCAA CGAGAAGAAG CTGCCACTGG TCGGCGACAT CCGCGACGAA
TCCGCCGAGG ACGTTCGCAT CGTCATCGAA CCGAAGTCGC GCAGCGTCGA TCCGACGTTG
ATGATGGAGT CGCTGTTCCG GCTGACCGAG CTGGAGAGCC GGATCCCGCT CAATCTCAAC
GTGCTGGTGA AGGGCCGGAT TCCGAAGGTG CTCGGCCTCG CCGAATGCCT GCGCGAGTGG
CTCGATCACC TGCGCGACGT GCTGCTGCGC CGCTCCGAAT ATCGCAAGGG CCAGATCGAG
CATCGGCTCG AAGTGCTCGG CGGCTATTTG ATCGCGTACT TGAACATCGA CAAGGTGATC
AAGATCATCC GCACCGAGGA CGAGCCCAAG CCGGTGCTGA TGAAGGCCTT CAATCTCACC
GAGATCCAGG CCGAAGCGAT CCTCAACATG CGGCTGCGCT CGTTGCGCAA GCTCGAGGAA
TTCGAGATCC GCACCGAGGA CAAGAACCTC CGCGCCGAGC TGAAGGGCAT CAACGCGGTC
CTGAAGTCCG AGACCGAGCA GTGGGCCAAG GTCGGCGAAC AGGTCCGCAA GGTCCGCGAG
ATGTTCGGGC CGAAGACGCC GCTCGGCAAG CGCCGCACCC AGTTCGCCGA CGCGCCGGAG
CACGATCTCG CGGCGATCGA AGAAGCCTTC GTCGAGCGCG AGCCCGTCAC CGTGGTGATC
TCCGACAAGG GCTGGGTGCG TACCCTGAAG GGGCACGTCG AGGATCTGTC GGGGCTCAAC
TTCAAGCAGG ACGACAAGCT CGGCCAGTCG TTCTTCGCCG AGACGACGTC GAAGCTGCTG
CTGCTCGCCA CCAACGGCCG GTTCTACGCG CTCGATGTCG CCAAGCTGCC CGGCGGCCGC
GGCCATGGCG AGCCGATCCG CATGTTCATC GACATGGAGC AGGACGCCGC GATCGTCACC
GTGTTCGTCC ACACCGGCGG CCGCAAATTC CTGATCGCCA GCCATGACGG GCAGGGCTTC
TTGGTCAACG AGGACGAGTG CGTCGGCTCG ACCCGCAAGG GCAAGCAGAT CCTCAACGTC
GACGTCCCCA ACGAGGCGCG TGCGCTCACG GTTGTCAGCG AGGGCGACGA CAGCGTCGCG
GTGATCGGCG ACAACCGCAA GATGGTGATC TTCCCGCTCG ATCAGGTGCC GGAGATGACC
CGCGGCCGCG GCGTGCGGCT GCAGAAGTAC AAGGATGGCG GCCTGTCCGA TATCGCCACC
TTCTCGTCGA AGCAGGGCCT CGGCTGGCGC GACTCCGCCG GCCGCGAGTT CAGCGCGACC
ATGAAGGAAC TCGCCGAATG GCGCGGCAAC CGCGCCGACG CCGGACGGCT GCCGCCGAAG
GGCTTCCCGA AGTCGAACAA GTTCGGACGT AGCATCGCAT GA
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| Protein sequence | MGKRLIPPEP AEIHEVQLRE ALEERYLAYA LSTIMHRALP DARDGLKPVH RRILYGMRLL
RLDPGTPFKK SAKIVGDVMG SFHPHGDQSI YDALVRLAQD FSSRYPLVDG QGNFGNIDGD
NPAAYRYTEA RMTDVARLLL DGIDEDGVAF RANYDGQSKE PVVLPGGFPN LLANGAQGIA
VGMATAIPPH NAAELCDAAL HLIEKPDAKS KALLRFVKGP DFPTGGIIID SKESIAEAYT
TGRGAFRTRA KWEQEEGARG TWTVVVTQIP WLVQKSRLIE KIAELLNEKK LPLVGDIRDE
SAEDVRIVIE PKSRSVDPTL MMESLFRLTE LESRIPLNLN VLVKGRIPKV LGLAECLREW
LDHLRDVLLR RSEYRKGQIE HRLEVLGGYL IAYLNIDKVI KIIRTEDEPK PVLMKAFNLT
EIQAEAILNM RLRSLRKLEE FEIRTEDKNL RAELKGINAV LKSETEQWAK VGEQVRKVRE
MFGPKTPLGK RRTQFADAPE HDLAAIEEAF VEREPVTVVI SDKGWVRTLK GHVEDLSGLN
FKQDDKLGQS FFAETTSKLL LLATNGRFYA LDVAKLPGGR GHGEPIRMFI DMEQDAAIVT
VFVHTGGRKF LIASHDGQGF LVNEDECVGS TRKGKQILNV DVPNEARALT VVSEGDDSVA
VIGDNRKMVI FPLDQVPEMT RGRGVRLQKY KDGGLSDIAT FSSKQGLGWR DSAGREFSAT
MKELAEWRGN RADAGRLPPK GFPKSNKFGR SIA
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