| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2841 |
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| Symbol | |
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| ID | 6410508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3093951 |
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| End bp | 3095399 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712719 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_001991824 |
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| Protein GI | 192291219 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.114938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCA CACTTCGCTA CCTTGGCCGC GCAGCCCGAC TGGTGGTGGC CTCGGCGCTG
GTCGCTGCGT CCGGCGGCTG CATCCTGACG CAAGATCTGC CCGATCCCGC GCTCGACCTG
CCGAATCGCT ACAAGGCAGC ATCGCGGACG GCGGTCGAGA AGCCGCCGGC GCTGGATTGG
TGGCGCGGCT TTCGGTCGGC CGAGCTGACG CAACTGATGG AAGAGGCGCA GACCGTCAAT
CTCGACGTGG CTGCCGCCGT CGCGCGTATC CGCCAGGCGG ATGCGCAGGC GCGGATCACC
GGCGCGGCAC TGTTGCCGAG CCTCAGCGGC AGCGGCAACG GCAGTCAGGT CAAGACATCG
GGCTCGAATA TCTCGAACAC GACGATCGCC GGCCGTCGCT ACAGCACCTA TTCGTCGTCG
CTGAGCGCGT CCTACGAGAT CGATTTCTGG GGCAAGAACC ATGATGCCGC GCTCGCGGCC
GAGGAGACCG CCACCGCGAA CCGGTTCGAC CGCGATACGG TGATGCTGAC CACGATGGCG
AGCGTCGCCA ACGCGTATTT CCAGGTGCTC GCCGCCCAAG ACCGAATTCG CACCGCCGAA
GGCAACATCA AGAGCGCCAG CCGGATTCTC GACGCGATCA AGCAGCGGCT CAAAGCCGGT
ACCGGCACCG ATCTCGACGT GGCGCAGCAG GAGAGCGTGC TGGCGAACCA GCGTGCCGCG
CTGCCGCCGT TGCGGCTGAC GCTGGCGCAG AACGTCAACG CGCTCGCGAC GCTGGTGGCG
CGCCCGCCGG AGAGCGTGAA GATTGCCGGC GGTTCGCTGA CGCGGCTGTC CTCGCCGCGG
GTGACGCCGG GGCTGCCGTC GGATCTGCTC ACCCAGCGGC CCGATATTCG CCGACAGGAG
GCGCAGCTCG CCTCGGCGAC TGCGAATGTC GGCAGCGCGC GGGCGCAATT CTTCCCGACC
ATCCAGCTCA CCGCGCAGGG CGGCTATCAG AGCGCGGCGC TGGCCTCGCT GTTCACGCCG
CAGGCGACGT TCTCCAACAT CGCCGCGGGG CTGACGCAGC CGATCTTCGA TGGCGGCCGC
ATCCAGGGCA ATTTCGATCT GACGCAGGCG CAGCAGGAAG AATTGCTGCA GACCTATCGC
AAGACCGTGG TGTCGGCATT CGCCGACGTC GACAACGCGC TGGAGTCGAT CAAGCAGAAC
ACCGAGCGGC TGCGGCTGCA GCGCGAGGTG GTGGCGTCGT CGCGGCGCGC CTTCGATCTC
GCCGAACAGC AGCTTCGCGC CGGCACCAGC GACATCGTCA CCGTGTTGAA TACACAGCTC
ACGCTGTTCC AGGCCGAGGA TGCGCTGATC CAGACGCAGC TAGCGCGCTT CCAGGCGATC
GTCAGTCTGT TTCAGGCACT CGGGGGCGGC TGGGAGCCAA AGATGGAAAG AACGGCCGAT
GCTCTTTAA
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| Protein sequence | MSTTLRYLGR AARLVVASAL VAASGGCILT QDLPDPALDL PNRYKAASRT AVEKPPALDW
WRGFRSAELT QLMEEAQTVN LDVAAAVARI RQADAQARIT GAALLPSLSG SGNGSQVKTS
GSNISNTTIA GRRYSTYSSS LSASYEIDFW GKNHDAALAA EETATANRFD RDTVMLTTMA
SVANAYFQVL AAQDRIRTAE GNIKSASRIL DAIKQRLKAG TGTDLDVAQQ ESVLANQRAA
LPPLRLTLAQ NVNALATLVA RPPESVKIAG GSLTRLSSPR VTPGLPSDLL TQRPDIRRQE
AQLASATANV GSARAQFFPT IQLTAQGGYQ SAALASLFTP QATFSNIAAG LTQPIFDGGR
IQGNFDLTQA QQEELLQTYR KTVVSAFADV DNALESIKQN TERLRLQREV VASSRRAFDL
AEQQLRAGTS DIVTVLNTQL TLFQAEDALI QTQLARFQAI VSLFQALGGG WEPKMERTAD
AL
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