| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2815 |
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| Symbol | |
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| ID | 6410481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3060023 |
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| End bp | 3063016 |
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| Gene Length | 2994 bp |
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| Protein Length | 997 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712693 |
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| Product | outer membrane insertion C-terminal signal |
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| Protein accession | YP_001991799 |
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| Protein GI | 192291194 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.71405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAATT TTCCAGCGTG GCTGAGCGTC TGGTCGGTGG TGGCCGTTGC GTGCGGTAGT
GCGCATGCGG CCGATCTGCA GAACGGCGCG GTCCCGTCGG CCGTGCCGGC GGCAACTAAC
TGGACCGGCT TCTACATCGG TACCCACGTC GGCGCCGCAG CGTCGGACAG CGCGTGGAAC
AGCATTGCTG GAAGCGGGGC CGGACTGGCG GCGGGGCCGT TCCCTGGTCA TGGCGTCAGC
GGCAATGCGA TCGCCGGCAT CCAGGGCGGC TACAACGCGC AGTTCGGCAA TTACGTGCTC
GGCATCGAAG GCGACGCCAG CTTCGGTTCC ATCAACGGCT TGGCCCGCTG CCTGCACGGC
ACCTTTGCCT GCACCAGCCG GATCGACGAG CTGTGGACGC TCGCCGCGCG CTTCGGCTAC
GCCGCGGGCG ATTTGCTGGT CTATGGCAAG GCCGGCGCCG CCTGGGCCGA TGTCCATCGC
CGGATGGCCA GCGGCAACTT CGTCAACGTC CTCGAAGCGT CGGAGACGCG GTCCGGCTGG
CTGCTCGGCG CCGGCGTCGA ATATGCCTTC CTGCCGGGCC TGTCGGCCAA GATCGAGTAC
AACTACGCAG ATTTCGGCAG TCGCTCCCTG ACGATGGCCG ATCAGTTCGG CGACGTTTCG
GACGTGTCGA TCGGCCAGAC CGCGCATCTG GTCAAGGTCG GCCTCAACTA CCGGCTCGGC
GCGGCCTCGG TCAGTGCAGC GCCGCTTCCC GGCGTGCCGC TGCCGCAGTG GAGCTGGACC
GGGATCTATC TCGGCGTCCA TGCCGGCGGC GGCTTCGGCA GCAACGATTG GGACTCCGCG
ACGGGCGCGC TGCTCGCGGC GTCGACGTCG GGCGGGTTCC CCGGGCGCGG CGACAGTTCC
GGGCTGTTCG GCGGCGGCCA GATCGGCGCG AACTATCAAT TCGGCCGCTG GGTCGCCGGC
GTCGAAGCGT CCGCCGCCGC GGCGGATATC GGCGGCTACG CCAAATGCGC CACCGATGTT
GGGACACGGA GAAATTTCAC CTGCCACAAT GAGCTGTCGT CGCTCGGCAC CATCACGGGC
CGGCTTGGGC AGACCTGGGG CAACCTGTTG ATCTATGGCA AGGCCGGCGC GGCTTGGGCA
ACCGGCAGCA GCGATGCGCA GCGCGCAGGC AGCGCCAGCC GCTTCACCGA AAGCGGCACG
CGCTGGGGCT GGGTCACCGG AACCGGCCTG GAATATGCGC TCAGTCCGAA CCTGTCGGCC
TTCGTGGAGT ACAACCACGT CGATTTCGGC ACCCAAGACA CCGCTTACGT CGATCAGTTC
GGCAATGCCT CCGAGGTCGG CTTCAAGCAG AAGTTCGATC TGGTGAAGGC GGGTCTGAAT
TATCGGCTCG GCTCGGGCGC GCCGACGCTC GGCGCGGGCG GCGACGTGCC GCTGTTCGTC
AAGGCCGCCG CGCTGCCGCT CGGCTGGCAG GTCGAGGCCG GCACCCGCTA TTGGGGCAGC
TCGGGGCGGA TGCAGAAGGA TCTGAACGAC AACGTCTCGC CGAGCCGGCT GAATTCGCGG
CTGATCTATG GCGATCAGAC CGGACATTCG CTCGAAGCCT TCGTGCGCGT CGATCACGCC
TCGGGCCTGT TCGCCAAGGC CAATCTCGGC CTCGGCCATC TCGTCAACGG TCAGCTCAAC
GACGAAGACT TCCCGAGCGA AGTGAACTAT TCGAACACGA TCTCGGAGAT GCGCGACGGC
CGCCTGGCCT TCGGCAGCGC GGACATCGGC TACAATTTCA TCAACGATGG CGGCCGTAAG
CTCGGTGGCT TCGTCGGTTA TCGTTCGCTC TACCAGACTG GCAACGGCTT CGGCTGTCGG
CAGATCGCGA CCGACTTCGA CACCTGTGGC GTCCCGTTTC CCACCAACTT CGTCGGTCTC
AGCGAGACCG AATCCTGGCG CGGCGTCGCG CTCGGCCTCA ACGTTCGCGC GCCGCTGACC
GAACGGCTGC GGCTGGAGGT CGATGCGGCC TATCTGCCTT ACGTCAATCG CGCCGGCTTC
GACAATCATT GGTTTCGCGC CGACATCAAT CCGCAGTCGG AGGTCGGCCA CGGCTGGGGC
ACGCAGTTCG AAGCGATCCT GTCCTACGCC GTTACCGATC GCTTCAGCGT CGGCGTCGGC
GGCCGCTATT GGTACTTCGC GACCGACAGC GCCAGCACGA TCTTCCCGAG AGAAGCGACG
ACGTCGCCGA TGCAGTTCTA TTCCGAGCGC TACGGCGTCT TCCTCCAGAC CTCGTACAAG
TTCGGCGACG TCGATGCGGC AGAAGCTTCG GCGCACGGCA TCACCAAGGC GCCGCCGCGG
ATCGCGCCCA CCAACTGGAC CGGCCTCTAT GTCGGCGCCA GCGTCGGCGC GGGCTGGGGC
CGCACCACCT ATGCGGACCC GTTCCCGACC CCGACGACGG GTGATCGGGC TGACCTCGGC
GGCGCGCTGC TCGGCGGCCA GATCGGCGCG AACTACCAGT TCGGTCATCT CGTCGCCGGC
GTCGAAGCCT CGGCCAACTG GGCGAACATC CGCGGCACCG ACACCTGCTT CGGCGCGTAT
CCCAATCCTG TGGTGGCCGG CTTCAACTGC GGCAGCAGGA TCGACGCGAT CGGCGCTTTC
ACAGCGCGCG GCGGCTACGC GATCGATCGC ACGCTGCTCT ACGTCAAGGG CGGCGCGGCC
TGGGATCGCC AGCAGGATCA GTTCAACACC GTCGGCGTCG GCGGCACGAC ACTGGCGAAC
ACCAGCACCA ATTGGGGCTG GACCGTCGGC GGCGGTCTCG AATACGCGCT GGCGCCGTCG
TGGTCGATGG CGCTGGAATA CAAGTACTTC GACTTCGGCG CGTCCCCGGC GTTCAGCACG
TCGGTGACGC CGGCATTGGA CGGCGTCAAT CTGGCGCCGC AGAGCAACAA GCTGCAGACG
GCGTCGCTCG GGGTGAACTA CAAGTTCGGG CCGTCGTTGT TCGTAAGGGA CTGA
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| Protein sequence | MKNFPAWLSV WSVVAVACGS AHAADLQNGA VPSAVPAATN WTGFYIGTHV GAAASDSAWN
SIAGSGAGLA AGPFPGHGVS GNAIAGIQGG YNAQFGNYVL GIEGDASFGS INGLARCLHG
TFACTSRIDE LWTLAARFGY AAGDLLVYGK AGAAWADVHR RMASGNFVNV LEASETRSGW
LLGAGVEYAF LPGLSAKIEY NYADFGSRSL TMADQFGDVS DVSIGQTAHL VKVGLNYRLG
AASVSAAPLP GVPLPQWSWT GIYLGVHAGG GFGSNDWDSA TGALLAASTS GGFPGRGDSS
GLFGGGQIGA NYQFGRWVAG VEASAAAADI GGYAKCATDV GTRRNFTCHN ELSSLGTITG
RLGQTWGNLL IYGKAGAAWA TGSSDAQRAG SASRFTESGT RWGWVTGTGL EYALSPNLSA
FVEYNHVDFG TQDTAYVDQF GNASEVGFKQ KFDLVKAGLN YRLGSGAPTL GAGGDVPLFV
KAAALPLGWQ VEAGTRYWGS SGRMQKDLND NVSPSRLNSR LIYGDQTGHS LEAFVRVDHA
SGLFAKANLG LGHLVNGQLN DEDFPSEVNY SNTISEMRDG RLAFGSADIG YNFINDGGRK
LGGFVGYRSL YQTGNGFGCR QIATDFDTCG VPFPTNFVGL SETESWRGVA LGLNVRAPLT
ERLRLEVDAA YLPYVNRAGF DNHWFRADIN PQSEVGHGWG TQFEAILSYA VTDRFSVGVG
GRYWYFATDS ASTIFPREAT TSPMQFYSER YGVFLQTSYK FGDVDAAEAS AHGITKAPPR
IAPTNWTGLY VGASVGAGWG RTTYADPFPT PTTGDRADLG GALLGGQIGA NYQFGHLVAG
VEASANWANI RGTDTCFGAY PNPVVAGFNC GSRIDAIGAF TARGGYAIDR TLLYVKGGAA
WDRQQDQFNT VGVGGTTLAN TSTNWGWTVG GGLEYALAPS WSMALEYKYF DFGASPAFST
SVTPALDGVN LAPQSNKLQT ASLGVNYKFG PSLFVRD
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