Gene Rpal_2812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2812 
Symbol 
ID6410478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp3057421 
End bp3057972 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content70% 
IMG OID642712690 
ProductTripartite ATP-independent periplasmic transporter DctQ component 
Protein accessionYP_001991796 
Protein GI192291191 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCACG GCCCCGTGCC CGGCCAGCCG GACCCGACCA GCGCCGCGCA GCGCGAGACC 
GGCGGCCCGC TCGGCCACGC GCTGGCGCTG GTCAACCGAG CCATCCTCGT CCTCGCCGCG 
GTCGCGCTGG TGGTCGCCTG CTGCATCCTC AGCTACAGCG TGGCGGTACG CAGCCTGTTC 
CACAGCGCCA CCTATTGGCA GGACGAGGCC GCGGTGTTCC TGCTGGTCGG CGCCACCTTC 
CTGACCGCCG CCTTCGTGCA AAGCCAACGC GGCCATATCG GCATCGAGGC GTTCACCGGG 
CTGCTGCCGC CGGCCGTGAA CCGCGTCCGG CTGCTGCTGG TCGACGTCGC CAGCCTCGCC 
TTCTGCGGCT TCTTCGCCTG GAAATCCTGG ACGCTGACGC ACGAGGCCTA TGTCGACGGC 
CAGGTCTCGA ATTCGATCTG GTCGCCGCCG CTCGCCATCC CCTACGCGCT GATGGCCGCC 
GGCATGACGC TGCTGTGCCT GCAGATCGCG GTGCAGATCG TGAACTCCTT CAGTGGGACG 
AAGCGCGCGT GA
 
Protein sequence
MMHGPVPGQP DPTSAAQRET GGPLGHALAL VNRAILVLAA VALVVACCIL SYSVAVRSLF 
HSATYWQDEA AVFLLVGATF LTAAFVQSQR GHIGIEAFTG LLPPAVNRVR LLLVDVASLA 
FCGFFAWKSW TLTHEAYVDG QVSNSIWSPP LAIPYALMAA GMTLLCLQIA VQIVNSFSGT 
KRA