| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2790 |
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| Symbol | |
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| ID | 6410454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3033898 |
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| End bp | 3035127 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712666 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001991774 |
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| Protein GI | 192291169 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0861684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGATC GCGATTCCCC AACCTCTCTC ACCCGTCGCC GCCTGCTGCA GACGGCCGTC
GGCGCCGCCA TGATGCTGCC GGCCGCAGCT TCCGCCGCGG CGCCGGCCGG CTTCGATGAA
TGGCGCGACG CGTTCCGGGC GAAGGCGCTC GCCAAAGGCG TCTCGCCCCG CACCTGGGAT
CGGGTGATGG GATCGCTCGA ACCCGACATG AGCGTGTTCA AGAACTTCCA GAAGCAACCG
GAATTCAACG AGCAGCTCTG GCAGTACATC AACCGTCGGG TGTCGGACTG GCGGATCACC
GCCGGCCGCG AGGCGCTGCG CAAGAACGAA GCGTTGTTCG CGCGGATCGA GCGCGACTTC
GGCGTCGAGC GCGGCACACT GCTGGCGCTG TGGGGCGTCG AGAGCGCCTA TGGCGATCCG
CTGGTGCAGC AGAACCATAT GCGTCCGGTC TTCCCCTCCC TCGCAGCGCT GGCTTGGCGC
GAGCCGCGGC GGCGTCCGTA TTGGGAGACC GAGCTGATCA ATGCGCTGCG GATCGTCGAC
AAGGGCTGGT CGACGCCGGA GGAAATGCGC GGCTCCTGGG CCGGCGCGAT GGGCCACAGC
CAATGGATGC CCGAGGTTTG GCTGAACGTC GGCATCGACT ATGACGGCGA CGGACGCGTA
TCGCCGTTCG GCCGGCCCGA CGACGCGCTC GGATCGACTG CGAAGTATCT GGTCCGGCGC
GGCAACTATC ACCGCGGCGA GCATTGGGGC TACGAGGTCG AAGGCCCCGG CGGCGCGGTC
AGCGGCAGCC GCAGCTATCT GGCGTGGTCG CGCTCCGGCG TCTCCCGCGC CGACGGCCAG
CCGTTTCCTG ATTCCTCTGC CAGCGCAACC ATGTGGGTGC CGGTCGACGG AGGTCCGAAA
TTCCTGATCG GGCCGAATTT CTACGCGGTG AAGAGCTACA ACCCGTCGAT GAACTACGCG
CTCGCGATCT GCCATCTCGG TGATCGCATT CTCGGCGGCA GCCCGTTCAT CCATCCGTTC
CCCGGATCGG AGCGCGCGCT GACGCTCGCC GAGGTGCAGG AGATGCAGAC GCGGCTGACA
AGCGCCGGCT TCGACACCGG CGGCACCGAC GGCCGGGTCG GCAACGACAC CATGAAGGCG
ATCCGGGACT TCCAAATCAA ATCCGGCCTT CGGCCTGCCG ACGGCTATGG CGGACTGAAG
GTGCTGGCGC GACTGCGGCA GGGTGGATAG
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| Protein sequence | MVDRDSPTSL TRRRLLQTAV GAAMMLPAAA SAAAPAGFDE WRDAFRAKAL AKGVSPRTWD
RVMGSLEPDM SVFKNFQKQP EFNEQLWQYI NRRVSDWRIT AGREALRKNE ALFARIERDF
GVERGTLLAL WGVESAYGDP LVQQNHMRPV FPSLAALAWR EPRRRPYWET ELINALRIVD
KGWSTPEEMR GSWAGAMGHS QWMPEVWLNV GIDYDGDGRV SPFGRPDDAL GSTAKYLVRR
GNYHRGEHWG YEVEGPGGAV SGSRSYLAWS RSGVSRADGQ PFPDSSASAT MWVPVDGGPK
FLIGPNFYAV KSYNPSMNYA LAICHLGDRI LGGSPFIHPF PGSERALTLA EVQEMQTRLT
SAGFDTGGTD GRVGNDTMKA IRDFQIKSGL RPADGYGGLK VLARLRQGG
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