| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2787 |
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| Symbol | |
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| ID | 6410451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3030382 |
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| End bp | 3032223 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642712663 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_001991771 |
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| Protein GI | 192291166 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCTC CCATCTCCGT TTTGCCGGCC GAGACCGTGC CGGCGTTTCT CGGCGTGACC
CGCTCGGCCA CCGGCAAGGC GTGGCGCGAC CGGCTCGATG CCCGCGCCAC CGCCAAAGCG
CAGGCGATGG TGCAGCGTTA TCAATTGCCC GAAATGCTGG CGCGGGTGCT GGCCGGGCGC
GGTGTGGAGA TCGACCAGGT CGAGGACTTC CTCGACCCGA CCATCCGCAA GCTGATGCCC
GATCCGGCGT CGCTGACCCA GATGGAAGCC GGCGCCAAAC GGATCGCGGA TGCCGCCTCG
CGCGGCGAGA AGGTGGCGAT CTTCGGCGAC TACGACGTCG ACGGCGCGAC GTCGTCGGCG
CTGCTCGCCT GGCATCTGCG CCACTGCGGG CTCGATCCTT TGATCCACAT TCCGGATCGC
ATCTTCGAAG GCTACGGCCC GAACATCGAC GCGATCCGCA TGCTCGCCGG CAAAGGCGCG
ACGCTGCTGA TCACCGTGGA CTGCGGCACC ACCAGCCTGG AGCCGCTCGC GGAAGCGCGG
CGGCTCGGGA TGAGCGTGGT GGTGATCGAT CATCACCAAT GCGGCGACGA GCTGCCGGAC
GTTGATGCGT TGATCAATCC GAACCGGCCC GACGACCTGT CCGGGCTCGG CCATCTTGCC
GCGGTCGGCC TGGTGCTGAT GACGCTGGTC GCGGTCAATC GCGAGCTGCG GCATCGCGGG
TTCTGGACCA CCGAGCGGCC GGAACCGAAC CTGCTCGACA TGCTCCACCA CGTCGCGCTC
GGCACAGTGG CGGACGTCGC GCCGCTGGTC GGGCTCAACC GCGCGTTCGT CGCCAAAGGC
CTGATCGCGA TGCGTCGCCG CGACCATGTC GGCCATACCG CGCTGATGGA CGTTTCGCGG
TTGAACGGTC CGCCGGAGGC GTGGCATCTC GGCTTCATGC TGGGGCCGCG CATCAACGCT
GGCGGACGCA TCGGCCGCGC CGATCTCGGC GTCCGGCTGC TGCTCGAATC CGACGTCTCT
GAGGCCGCCC GGATCGCGGC CGAGCTCGAT CGGCTCAACA GCGAGCGCCG CGAGATCGAA
CAGAAAGCCG AAGCCCAGGC GGAAGCCGAG GCGATGGCCT CGCTCGGGCT CGAGGACAAG
GGCGCAGTGA TCGTCACGGC TTCCGAAGGT TGGCACCCCG GCGTGGTCGG GCTGGTCGCT
TCGCGGCTGA AGGAGAAGTT CGGCCGGCCG TCGTTTGCGA TCGCGCTGGA GCCGGGCGGC
ATCGGCACCG GTTCGGGCCG CTCGATCTCC GGCGTCGATC TTGGCAAGGC GGTGCGCCAG
GCGGTGCATG ACGGGCTGCT GCTGAAGGGC GGCGGTCACG CCATGGCGGC CGGTGTGACG
TTGCGAAAAG AACGGCTCGC CGAATTCCGC GCCTGGCTGG AGACGACGCT TGCCGGCGAC
GTCGCCAAGT CGCGCCACGT CAACGAGCTG TACATCGACG GCGCGGTGTC GGCGCGCGGC
GTCACGACAG AACTGGCGGC GACGCTGAAC CGGGCAGGGC CATTCGGTGC CGGCAATCCG
GAGCCGATCG TGGCGCTGCC GGCGCATCAG CTGATCTACG CCGACGAAGT CGGGCAGGCG
CATCTGCGGC TGCGCTTCAA GGCGGGGGAC GGCGCGATCG TCAACGGCAT CGCGTTTCGC
AGCGTCGGCC AGAAGCTCGG CAATGCGCTG ACCGAGAACC GCGGCCAGAC GCTCCACGTC
GCCGGCAGCC TCAGCGTCGA CCGCTGGCAG GGTGCCGAGC GGGTGCAGCT CCGCGTCATC
GACGTCGCGG TGCCGGATGC AGGGCCGACG ATGATCAGGT GA
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| Protein sequence | MTPPISVLPA ETVPAFLGVT RSATGKAWRD RLDARATAKA QAMVQRYQLP EMLARVLAGR
GVEIDQVEDF LDPTIRKLMP DPASLTQMEA GAKRIADAAS RGEKVAIFGD YDVDGATSSA
LLAWHLRHCG LDPLIHIPDR IFEGYGPNID AIRMLAGKGA TLLITVDCGT TSLEPLAEAR
RLGMSVVVID HHQCGDELPD VDALINPNRP DDLSGLGHLA AVGLVLMTLV AVNRELRHRG
FWTTERPEPN LLDMLHHVAL GTVADVAPLV GLNRAFVAKG LIAMRRRDHV GHTALMDVSR
LNGPPEAWHL GFMLGPRINA GGRIGRADLG VRLLLESDVS EAARIAAELD RLNSERREIE
QKAEAQAEAE AMASLGLEDK GAVIVTASEG WHPGVVGLVA SRLKEKFGRP SFAIALEPGG
IGTGSGRSIS GVDLGKAVRQ AVHDGLLLKG GGHAMAAGVT LRKERLAEFR AWLETTLAGD
VAKSRHVNEL YIDGAVSARG VTTELAATLN RAGPFGAGNP EPIVALPAHQ LIYADEVGQA
HLRLRFKAGD GAIVNGIAFR SVGQKLGNAL TENRGQTLHV AGSLSVDRWQ GAERVQLRVI
DVAVPDAGPT MIR
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