| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2786 |
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| Symbol | |
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| ID | 6410450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3029493 |
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| End bp | 3030218 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642712662 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_001991770 |
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| Protein GI | 192291165 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGCCA CCGATGCGAC AGACGTCAAA GCCCTGCTGT TCGACGTGTT CGGGACCGTG
GTCGACTGGC GTAGCAGCCT GATCGACGAT CTTTCGGCCT ATGCGGCGCA GCGTGGTTTG
CAGGGCGACT GGACCAAGCT GGTCGACGTC TGGCGGCAGG CTTACGTGCC GTCGATGGAC
GCGGTGCGCA AGAATCCGCA AGCCGATTTC CTGACCCTCG ACGAGCTGCA TCGGCGGTCG
CTGGAGCGGC TGGTCGGCGA GTTCGGCATC AAGGGGCCGA CCGAGGACGA TCTCAACTAC
ATGGTCACCG GCTGGCATCG GCTGAAGCCT TGGTCGGGCG TCGTTGCCGC GCTGGAGCGA
CTCCATACCA AGTACATCCT GGCGCCGCTG TCGAACGGCA ATGTCGGGCT GCTCACCCGG
ATGGCGAAGA ACGCCGGCCT GCCGTGGGAT ATGGTTTTCG GCAGCGACAT CTTCCGGCAC
TACAAGCCGG ATCCGGAGAA CTATCTCGGT GCTGCGAAGC TGCTCAATCT GCAGCCCGGC
GAAGTCATGC TGGTCGCTGC CCACAATTAC GACCTTCGCG CCGCGCAGGC GCTCGGCCTC
AAAACGGCGT TCATCCCGCG TCCGACCGAA TACGGTCCGC TACAGACGAT CGACTTCGAC
GCCACCGGCG ACTGGACCAT CGTGGCGGAC GATCTGGCCG GCATTGCCGA CCAGCTCGGA
TGCTGA
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| Protein sequence | MPATDATDVK ALLFDVFGTV VDWRSSLIDD LSAYAAQRGL QGDWTKLVDV WRQAYVPSMD
AVRKNPQADF LTLDELHRRS LERLVGEFGI KGPTEDDLNY MVTGWHRLKP WSGVVAALER
LHTKYILAPL SNGNVGLLTR MAKNAGLPWD MVFGSDIFRH YKPDPENYLG AAKLLNLQPG
EVMLVAAHNY DLRAAQALGL KTAFIPRPTE YGPLQTIDFD ATGDWTIVAD DLAGIADQLG
C
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