Gene Rpal_2704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2704 
Symbol 
ID6410368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2936150 
End bp2937139 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content71% 
IMG OID642712580 
Producthypothetical protein 
Protein accessionYP_001991688 
Protein GI192291083 
COG category[S] Function unknown 
COG ID[COG4765] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0700499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGAA GCCTGAGCCT AGTCGGTCTT GCGGCGTTGA TCGTCGCCCC GTTGATCGCG 
TTTGCGCCTC CTGCGCAGGC GCAGATCGGC AACATCTTCT CGGATCCGCC GCCGCGGCCG
CCGGGAACGG TGCCGCGTGG CGTGCAGCCG CCTGCCGACG ACGAAGAGGA AGAGGTGCCG
GATCTGCCGC CGCAGGGGCG GGTGCTGCCG GCCCCGGGCC GCGCGATGCA GGGCTCGGCT
ATGCCGGGAC CGGTGCAGTC GCAGCCGTTG CCGCCGCCGC CGGGCTCCAC CGTGATTCCG
CAGAACCCGC CGCCCGGGGC TCAGCAACCG GCAGAGCCGA ACACCGGTGT CGCCAATGCG
CCGGCCGCGA CCAATCCGCT TCCCGGTCTG CCGCCGGGCC AGCGCCAGCC GCGCGGTACG
CCGCCGGCCA ATCCGCCGCC GGCCCCGGCG ACGCTGCAGC CGGGCGACGA GATCGTCACC
GAGCCGCCGG CGCAGAAGAT CGTAAACAAG AAGGCGAGCT TCGCCGGCCT CGACAAGATC
ACCGGCCGCA CCATCAATTT CGACGCCGAC ATCGGCGAAA CGGTGCAGTT CGGCGCCCTG
CGGGTGAAGA CCGACGCCTG CTACACGCGG CCGTCGACCG AAGCTGCCAA CACCGACGCC
TTCGTCGAGG TCGACGAGAT CACGCTGCAG GGCGAAGTAA AGCGGATCTT CTCCGGTTGG
ATGTTCGCAG CCAGCCCCGG CCTGCATGCG GTCGAGCACC CGATCTACGA TATCTGGCTG
ACCGACTGTA AGGACCCGGA GACCTCGAAC GTCGCCAGTG CCCAGCCGGA TGCGCCGAAG
CCGGCCGCCC CGCCGCCGCC GCAGCGTCGC CGCCAGCAAC AGCAGTCGCA GCAAACGCTG
CCGCCGCCGT CATCACTGCA GCAGCCGGCG CCGCAGCCCC AGCGCCCGCA ACGCCCCCCG
CCGCCGCCGT TCCCGGGCTT CCAGCAGTAA
 
Protein sequence
MSRSLSLVGL AALIVAPLIA FAPPAQAQIG NIFSDPPPRP PGTVPRGVQP PADDEEEEVP 
DLPPQGRVLP APGRAMQGSA MPGPVQSQPL PPPPGSTVIP QNPPPGAQQP AEPNTGVANA
PAATNPLPGL PPGQRQPRGT PPANPPPAPA TLQPGDEIVT EPPAQKIVNK KASFAGLDKI
TGRTINFDAD IGETVQFGAL RVKTDACYTR PSTEAANTDA FVEVDEITLQ GEVKRIFSGW
MFAASPGLHA VEHPIYDIWL TDCKDPETSN VASAQPDAPK PAAPPPPQRR RQQQQSQQTL
PPPSSLQQPA PQPQRPQRPP PPPFPGFQQ