| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2682 |
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| Symbol | |
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| ID | 6410345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2909930 |
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| End bp | 2910745 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642712558 |
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| Product | NLPA lipoprotein |
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| Protein accession | YP_001991667 |
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| Protein GI | 192291062 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
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| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGTTC TGAAAACCGC CGCGCGCGCG CTCGGCCTGA TCGCGGCTTT GAGCGCGCTG
TCATCCATCG CCATCGCTGA CGCCGCCAAG GGCCCGCTAC GGGTCGGCAC CAATGCGGGC
TTCGCTCCGC CAATCGAAGC CGCAGTGGCG GTTGCAAAGG CGCAAGGGCT GGACGTCAAG
CTGATCGAGT TCACCGATCC GGTGACGCCA AACACCTCGC TCGCGAACGG CGAGATCGAT
CTCAACTATT TCCAGCACAA ACCGTTCTTG GACGTCGTCA AGGCGGCACG CGGCTTCGAT
CTCGAGCCGG TCGGGATCGG CATCGCCAAC AAGACCGGGC TGTTCTCCAA GAAGTACAAG
AGCCTGAGCG AGCTGCCGGT CGGTGCCCGC GTCGCGCTCG CCGGCGATCC GTTCAATTTC
GGCCGCGGCC TCGAATTGCT GGAGGCCGCC GGGCTGATCA AGCTGAAGCC GGATCACGGG
CCGCAGGTCA ATGTCGACGC GGTCATCGAC AATCCGAAGA AGCTCAAGTT TCTGGAGATC
GACTTCCACC AGCTGCCGCA GTCGCTCAAC GAGGTCGACC TGGCCCACGG CTACACCCAC
TTCCTGAAGG CGTCCGGCGT GATCGATCCG CACGCGGCGC TGTTCTGGGA GCCGATCAAT
CCGCGCTACG GCATCGTCTT CGTGGCGCAG CCGAAGAACA AGGACGATCC GAGGATCGCG
CAGTTCATCA AGATCTACCA GACCTCGCCT GAAGTGCGCG CAGTGCTCGA CAAGCAATAC
GGCGACCTCT ACGTCCGGCT TTGGGAACGT GAGTGA
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| Protein sequence | MIVLKTAARA LGLIAALSAL SSIAIADAAK GPLRVGTNAG FAPPIEAAVA VAKAQGLDVK
LIEFTDPVTP NTSLANGEID LNYFQHKPFL DVVKAARGFD LEPVGIGIAN KTGLFSKKYK
SLSELPVGAR VALAGDPFNF GRGLELLEAA GLIKLKPDHG PQVNVDAVID NPKKLKFLEI
DFHQLPQSLN EVDLAHGYTH FLKASGVIDP HAALFWEPIN PRYGIVFVAQ PKNKDDPRIA
QFIKIYQTSP EVRAVLDKQY GDLYVRLWER E
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