| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2628 |
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| Symbol | |
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| ID | 6410290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2845198 |
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| End bp | 2846067 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642712504 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_001991614 |
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| Protein GI | 192291009 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCT CGGTCTGCAC CATCACATTC CGCCATCACC TGCTCTGCTT CAGCGAGATC
GTCGAGTGGA CGCGACGCAA CGGCTTCGAC GGCGTCGAAC TGTGGGGCGC TCATGCGCGC
GGCCTAATGC GGACGCACCC GGAATACGAT GCAGACTGGC TTCGCAGTTA CGGCCTGTCG
GTGCCGATGC TGAGCGATTA CCTGCCGACC GACGTCGACA TCACGGACAC TCGCCACCGT
GCAATCGAGC TCTGCCGGAT TGCACAGCAT TGGTCGGCGC GAAAGATCCG CACCTTCGCC
GGTAACAGAC CGAGCGCCCA GCTGGCGCGC GAGCAGCGCA GAGCGCTGGC CGGCCGGATC
GGTGAGATCG CCGGCATCGT CCATGATCAC GGCATCCGGC TGTTGGTCGA GACACACCCG
AACACGCTGG CCGACAGCGT CGACTCGACA CTGGGCCTGT TGGCGGATGC CAACCACCCA
GGTCTCGGTA TTAACTTCGA TGCTCTGCAC GTCTGGGAAG GTGGCGATGA TCCCGTTCTG
GCGCGCCGCA CGCTCGCGGA CTTCATCGGG CACTATCATC TCAAGAATGT TCGATCACGC
GACGAGCTCC ACGTGTTCTT CCCGGACAAC GTCTATTCCG CCGCCGGCTC CCGTGACGGC
ATGGTGCCGC TGTTTGACGG CGCGATGGAT TACGAAGGTT TCCTCGCATC CTTGGCGGAC
GAAAGTAACG CGGAGGCATC ACTCGAATGG TTCGGCAACG ACGGCTTCGA GACGTTGACC
CGCGATCGGC TGGCCATTCT CTCACACTTC ACTTCGGCAA GGGGCGGCGC CGGATCCGCA
CGCGATCGCC GGCCACGTCG CCTCAGCTAA
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| Protein sequence | MKLSVCTITF RHHLLCFSEI VEWTRRNGFD GVELWGAHAR GLMRTHPEYD ADWLRSYGLS
VPMLSDYLPT DVDITDTRHR AIELCRIAQH WSARKIRTFA GNRPSAQLAR EQRRALAGRI
GEIAGIVHDH GIRLLVETHP NTLADSVDST LGLLADANHP GLGINFDALH VWEGGDDPVL
ARRTLADFIG HYHLKNVRSR DELHVFFPDN VYSAAGSRDG MVPLFDGAMD YEGFLASLAD
ESNAEASLEW FGNDGFETLT RDRLAILSHF TSARGGAGSA RDRRPRRLS
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