| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2625 |
|---|
| Symbol | |
|---|
| ID | 6410287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 2842366 |
|---|
| End bp | 2843316 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642712501 |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_001991611 |
|---|
| Protein GI | 192291006 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4605] ABC-type enterochelin transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.544933 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGACA GATCGACGAT CGTGCTCGCA ACGCTCGGCG CGTTCGCGCT CGCTTGCATC
GCGGCCTACA TGACGGTCGG TCTACGTGGA AACCTCTGGT TCGCGCTCGA ACTGCGCGCC
GTCCGCCTGG TCGCGCTGAT CGTAGTCGCG GTCTCGATCG CGGTCTCGAC GGTGGTGTTT
CAGACGGTGA CGACCAATCG GATCCTGACG CCGTCGATCA TGGGGCTCGA CGCGCTCTAC
GTGTTCAGCC AGTCGCTGTT GGTATTCGCC GTCGGCGGGC TTGGCTTCGC GGCGCTTGAC
CCGCGGCTCA AATTTGCCGG CGAGGCCACG GTGATGGTGA TCCTCGCGGC GCTGCTGTTT
CTGCCGCTGC TCAAGGCCCG CATGGACCTG ATCCTGATGC TGCTCACCGG CGTCACCGTC
GGCGTTCTGT TTCGCAGCCT GTCATCTCTG CTCGCCCGGC TCATCGACCC GAACGACTTC
GTGGTGCTGC AGAGCGTCAG CTACGCAAAT TTCAGCAAGA TCCACGGCGA GCTTCTCGTC
GCCTCCTGCG CACTGACGCT GGTCGGCATC GTCATCGTCT GGCGGATGCG CCACGTGCTC
GACGTGCTTG CGCTCGGCCG CGATGTCTCG ACCGGCCTGG GCCTGGAATG GCCGCGCGTC
GTCGCCGGCA TGATCATGCT GGTCGCGGCG CTGGTCGCGG TCTCGACCGC GCTGGTCGGC
CCGGTGGCGT TCTTCGGCCT GCTCGTCGTG GCGCTCGGCG AGCGGCTGCT CGATACACGT
CGCCACGCGA TCCTGCTTCC GGCCGCGGCG CTGGTCGCCG TGATCGTGCT GGTCGGCGGC
CAAACGATCC TGCAGCATGT TCTCGGCGGC GCCTCCACGC TCGGCGTCGT CATCGAGTTC
GTCGGCGGTC TGGTGTTCCT CGCAATGCTT CTGCAAGGAG TCCGGCGATG A
|
|---|
| Protein sequence | MRDRSTIVLA TLGAFALACI AAYMTVGLRG NLWFALELRA VRLVALIVVA VSIAVSTVVF
QTVTTNRILT PSIMGLDALY VFSQSLLVFA VGGLGFAALD PRLKFAGEAT VMVILAALLF
LPLLKARMDL ILMLLTGVTV GVLFRSLSSL LARLIDPNDF VVLQSVSYAN FSKIHGELLV
ASCALTLVGI VIVWRMRHVL DVLALGRDVS TGLGLEWPRV VAGMIMLVAA LVAVSTALVG
PVAFFGLLVV ALGERLLDTR RHAILLPAAA LVAVIVLVGG QTILQHVLGG ASTLGVVIEF
VGGLVFLAML LQGVRR
|
|---|
| |