| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2617 |
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| Symbol | |
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| ID | 6410279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2832329 |
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| End bp | 2833936 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642712494 |
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| Product | putative membrane protein of unknown function |
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| Protein accession | YP_001991604 |
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| Protein GI | 192290999 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCTCG CGAACGCCGA AGCGCTTCGT CGCGATCCGG GCGCGGCATC GTCCGGGCCG
GCCATGATCC GCTATTGCTG GTTGCAACGC GCCTTCCGCC GCGGGGCTGC GGCGCTGGTG
CATCCGCGGC TCGGGGCTCC GTTGCTGTTG GGCGTTGTCC TCGGCAATGC GCTGCTGTGG
GTCGCTGCGC TGGCCATCCT GAAATTCGCT CAGGTGCTGC ATTCCGACAG TACGGAAGCG
TTCGCGTGGG GCCAGACCCT GGCCTGGGGC TCCGGCAAGC ACCCGCCGAT GGCCGGGTGG
GTGGCGCGGG CGTGGTTCAG CGTGTTTCCG ACCAGCGATT GGGCTTTCTA CGCGCTGGCG
ATGGCCGTCA CCGGCGCCAC TGTCTTGCTG ATCAGGTTGC TGGCCGGGGA GGTGGTCGAT
CGTCGGCGCG CCGTTCTCGC CACGCTGCTG GCGATGATCT ACCCGATCCT GAATTTCAAG
GGCTACAAGT TCAATCCCGA CTTGTTACAA CTGCCGTTCG TGGTGCTGAT TGTGTGGGCC
TATATGGTCG CCGCCGAACG GCGTACCGCG CTGTGGGGCG TGGTAATCGG GCTCGCAGGC
AACGGCGCGG TGATGACGAA ATACTGGGGT GCGTGGGCGC TGGTCGCGAT TGCGGTTGCG
GCAGTGACGC GGCCGGACCG CAACCGGTTG TTCCGCTCGC CGGTGCCCTA TGTGGCGGTC
GCGGTGTTCG TGCTGGCAAT TGGTCCGCAC CTTGACTGGC TTTCTGCGGT CGGCTTCACG
CCGTTCCGCT ACGCCTCGCA ATTCTTCGTG GTCGATCGCG GGACGGCGGC GCGGCATTCG
ATAGACTCGA CGCTGCACGC CTTCGCTCTG CTGCTGCCGG CGCTGGTGGC CGGCGCCGTC
GCCGTGTTGC TGCCGCGGTT TAGACGCGTA ACGCCGCCGC CGGACGACGC GGTGGAGCGG
GCCCGCCAGA TCTGGCTCAT CGTCGCCGTG TTGGTAATCG GCCCGATCAT CGCCGCCATT
GCGTTGCCGG TCCGGATGAA GAGCGATTGG ACCATCCCGC TGTTCTCGCT GGTCCCACTC
GCCGTTCTGG CGCTGCCGCG GCTTGCCGTG CCGCTGCGCG CCGTGGCCAG GGCGGCGGTG
ATCCTGCTGA TGCTCGGGGT GGGAGCGTTG ATCGCGGCGC CGGGGCTCGC GACGGTGAAG
GTGCTGTTCG AACCGAACCG TGCCCTGTCG CCGCGGCTGG ATCGTCTGGC GGCGATAGCA
ACCGACCTGT GGCGTGAGCG CGCCGGCACG CCGCTCAGGA TTGTAGTCGG CGATAGCGAG
GAGATCGCGA CCGTATCGTT CTACAGCGCC GACCATCCGC GCATGTTCTT GGCTGGCGCG
CCCGAACTGA CGCCGTGGAT TTCGGCCGAA ACGCTCGGTC GCAGCGGCTT CGTCGGGATA
TGTCCGGCCG CAGCACCGGC CTGCGTCGAC CGGGTCATTG CACTGCGACC GCGGGCCGAG
CAGATCGCCG TGACCACCGA ACGGAGTGCG CTCGGGCAGA CCCTGCCGCC GGACCGGTGG
GTCATGTTGC TCGCGCTACC GGAAGCCGAT GCTGAGGTCA CTCGCTAA
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| Protein sequence | MTLANAEALR RDPGAASSGP AMIRYCWLQR AFRRGAAALV HPRLGAPLLL GVVLGNALLW
VAALAILKFA QVLHSDSTEA FAWGQTLAWG SGKHPPMAGW VARAWFSVFP TSDWAFYALA
MAVTGATVLL IRLLAGEVVD RRRAVLATLL AMIYPILNFK GYKFNPDLLQ LPFVVLIVWA
YMVAAERRTA LWGVVIGLAG NGAVMTKYWG AWALVAIAVA AVTRPDRNRL FRSPVPYVAV
AVFVLAIGPH LDWLSAVGFT PFRYASQFFV VDRGTAARHS IDSTLHAFAL LLPALVAGAV
AVLLPRFRRV TPPPDDAVER ARQIWLIVAV LVIGPIIAAI ALPVRMKSDW TIPLFSLVPL
AVLALPRLAV PLRAVARAAV ILLMLGVGAL IAAPGLATVK VLFEPNRALS PRLDRLAAIA
TDLWRERAGT PLRIVVGDSE EIATVSFYSA DHPRMFLAGA PELTPWISAE TLGRSGFVGI
CPAAAPACVD RVIALRPRAE QIAVTTERSA LGQTLPPDRW VMLLALPEAD AEVTR
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