Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2600 |
Symbol | |
ID | 6410262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2810685 |
End bp | 2812082 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642712478 |
Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
Protein accession | YP_001991588 |
Protein GI | 192290983 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG0031] Cysteine synthase [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
TIGRFAM ID | [TIGR01137] cystathionine beta-synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0422691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCTGG CCCGTCTTGC CACACCGAAG GATCGCACGC CCAAGGGGCT GATCGATCTG ATCGGAAACA CGCCCCTGGT GCAGCTGACA CGGCTGGATG CCGGCCCGTG CCGGTTGTTC GCCAAACTCG AAGGCCAGAA TCCAGGCGGT TCGATCAAGG ATCGACCGGC GCTGGCGATG ATCGAGGCGT TCGAGCGCAG CGGCGAACTG CGGCCGGGCG GGACCTTGGT CGAAGCCACC GCCGGCAACA CCGGCCTCGG GCTGGCGCTG ATCGCCGCGC TCAAAGGCTA CCGGCTGGTT CTCGTCATCC CGGACAAGAT GAGCCGCGAA AAGGTGCTGC ACCTGAAGGC GATGGGCGCC GAGGTGGTGA TGACCCGTTC CGACGTCGGC AAGGGGCATC CGGCTTACTA TCAGGATCTT GCCCAGAAGA TCACTTCCGA AACCCCTGGC GCGGTGTTCG TCAATCAGTT CGCCAATCCG GCCAATCCGC TCGCGCATGA ATACGGCACC GCGCCGGAAA TCTGGGAGCA GATGGATCGG CGCGTCGACG CGGTGGTGTG CGGCATCGGC TCCGGCGGCA CGCTGACAGG GATCGCGCGG TTCTTTCAGC GCGCCTCGCC ATCGACCGAG ATCATTCTGG CCGATCCGAA AGGCTCCGTG CTGGTCGACG TGGTCGAAGG GCGGGAGCCG GGCCCTGTCG GAAGCTGGCT GGTCGAGGGC ATCGGCGAGG ACTTCGTCCC GAGCAATGCC GAACTGAAGC TGGTCACACG CGGCTACACC GTGACCGATG CGGAATCCTT CCACGCTGCG CGTGAGTTGC TGCGACGGGA AGGGATTCTC GCCGGCTCGT CGTCGGGCAC GCTGCTGGCG GCTGCGCTGC GCTATTGCCG CGAGCAGACC CGGCCGAAGC GGGTGGTGAC GCTGCTGCCG GACGGCGGCA ACAAATATCT GTCGAAGATG TTCAACGATA CCTGGATGGC CGATCAAGGC TTCGTGCCGC GCCGGCACGA CGGGGACCTG CGCGACCTGA TCGTGCGTCG CCATGACGAG GGCGCTTCGA TCACGGTCGC TCCCGAGGAT ACGCTGAACT TCGCCTATTC GCGGATGAAG CTGTACGAGG TGTCGCAACT GCCGGTGCTG GTCGACGACC GCGTCGTCGG CATCATCGAC GAGTCCGATC TGTTGATGGC GACGATCGGC GATCCGGCCA AATTTGCCGA GCCGGTGCAC TCGGCGATGA GCAAGCGGGT CGAAACCGTC GAGGCGTCGG CGCCGTTCGA GAGCCTGATG CCGGTGTTCG ATCGCGGCCT GGTCGTCGTG GTCGTCGACG GCTCGCGCTT CCTCGGCCTG ATCACCCGGA TCGACCTGAT CAACCATTTG CGTAGCAAGG TGCACTGA
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Protein sequence | MSLARLATPK DRTPKGLIDL IGNTPLVQLT RLDAGPCRLF AKLEGQNPGG SIKDRPALAM IEAFERSGEL RPGGTLVEAT AGNTGLGLAL IAALKGYRLV LVIPDKMSRE KVLHLKAMGA EVVMTRSDVG KGHPAYYQDL AQKITSETPG AVFVNQFANP ANPLAHEYGT APEIWEQMDR RVDAVVCGIG SGGTLTGIAR FFQRASPSTE IILADPKGSV LVDVVEGREP GPVGSWLVEG IGEDFVPSNA ELKLVTRGYT VTDAESFHAA RELLRREGIL AGSSSGTLLA AALRYCREQT RPKRVVTLLP DGGNKYLSKM FNDTWMADQG FVPRRHDGDL RDLIVRRHDE GASITVAPED TLNFAYSRMK LYEVSQLPVL VDDRVVGIID ESDLLMATIG DPAKFAEPVH SAMSKRVETV EASAPFESLM PVFDRGLVVV VVDGSRFLGL ITRIDLINHL RSKVH
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