Gene Rpal_2587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2587 
Symbol 
ID6410249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp2796773 
End bp2797450 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content58% 
IMG OID642712465 
Producttranscriptional regulator, GntR family 
Protein accessionYP_001991575 
Protein GI192290970 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGAGC ACACCAATAA GTCTGAGCAG GTCTACGACG TGATCGAGAG AATGATCACG 
TTTCAAGAGC TGAAGCCCGG CCAAATGGTC AGCGAAGTGA CGTTGATGGA GGCGACCGGT 
TTTGGTCGAA CGCCTGTCCG CGAAGCACTG CAGCGTCTCG CCTGGGAGCG AATGGTCGAG 
ATACATCCAC GGAAGGGAGC CTTCATTCCG TTGATCTCGG TCGAGGTCCA ACTCAAGCTG 
CTCGAACTAC GCAGAGTGGT CGAAGAATTC GCGGTGCGAA CTTGCGTTCA TCGCGCCACC 
TCCGTTCAGA AGCGGATGAT GCTCGAATTG GCACGGGAGT TTGACGAAGT CGCAAAGTCC 
GACGACATCG TTCTGTATGG GGATCTGCTG AAGCGGGTTC ATCAGATCAT CGTTGCGGCG 
GCGCAGAACG AATATCTGAC CTCGAGCATG GCTCCGCTTC AGGGCCTGTC GCGACGGTTC 
TGGTTCGCCA ATATTTCAGA TCGCCCCACA GAGTTGATGG TGGCGTCCGA GAAGCATTCG 
GCGACGCTGA GAGCGATCAA CCAGGGCGAC GAGCAGGCCG CCGCCACCGC GTCGCTCGCG 
CTGAACGATT ACCTCACCGA CTTTGCGTAC CGCACCCTCC GCGGAGCCGA TGCCAGGATC 
GCGCTCAAAC AGCGATGA
 
Protein sequence
MPEHTNKSEQ VYDVIERMIT FQELKPGQMV SEVTLMEATG FGRTPVREAL QRLAWERMVE 
IHPRKGAFIP LISVEVQLKL LELRRVVEEF AVRTCVHRAT SVQKRMMLEL AREFDEVAKS 
DDIVLYGDLL KRVHQIIVAA AQNEYLTSSM APLQGLSRRF WFANISDRPT ELMVASEKHS 
ATLRAINQGD EQAAATASLA LNDYLTDFAY RTLRGADARI ALKQR