| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2585 |
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| Symbol | |
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| ID | 6410247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2793311 |
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| End bp | 2794990 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642712463 |
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| Product | Dihydroxy-acid dehydratase |
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| Protein accession | YP_001991573 |
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| Protein GI | 192290968 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.450911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAC TCAGAAGCAA CTTCGAGCCG GGTTCGACCC GGTGGGCCGT GCGTCGCGCG
CAATGGCTGG CGATGGGCAT CAAGGAGGAG GATTTCCACA AGCCCAAGAT CGCGGTGGTC
AATTCATCCA GCGGTCTCTC GGTCTGTTAC CAGCACCTGG ACGATATCTC CCGGAAGGTG
CAGCAGGCGA TCCGCGATGC AGGTGGTCTC CCATTTGAAA TCCGCACCGT TGCCCCGTCT
GATTTCGTCA CCTCCGCAGG CCGCAAGGCG CGCTATCTGA TGCCGTCTCG CGATCTCCTT
GTGAACGACG TCGAGGTCCA GGTCGAAGGC GCGGAATTGG ACGGCATGGT TCTACTCGCC
TCCTGCGACA AGACCACGCC CGGCCAGTTG ATGGCCGCTG GTCGCTTGAA CATCCCGTCG
ATCGTCCTGG CCTGCGGATA TCAGCTCGGC GGCCATTGCG GCGGCAAAGA CGTCGATATC
GAAGACCTCT ACAACGGAGT CGGCACCTAC AAATCGGGCC AGATCAGCTT GCAGGATCTG
ACCGACATGT CCTGCGCCGC AATCAAGGGA CCAGGCGTTT GCGCCGGTCT CGCAACCGCC
AATTCCATGC ACTGCCTCGC AGAGGCACTC GGCATGGCCC TGCCCGGCAA TGCGCCGATC
CGCGCTGGAG GCGAGCGGCT GTCCGACTAC GCGGTGCAGG TCGGCCAGGC CATCGTGCGG
CTCATTCAGC AAGACCTGAG GCCGCGGCAG ATCCTGACCA AGGCGTCGAT CCAGAACGGA
ATTCGTATCG CGCAAGCGCT GGGGCTTTCG GTCAACACGG TGCGGCATCT GACGGCGATC
GCCATCGAAA GCCGCATCGA AATGGACGTC GTGGCAGAAT ACGAGGCTCT GTCGAAGGAC
GCGGTTCAGA TCACGCAAGT GCGTCCCAAC GGTCCGCATC GGATCGAGAT GCTGGACGCT
GCAGGTGGCG TGCGAGGCGC AATGAAGCAA CTCGCCAGCA AACTCGATCT CTCCACGATG
ACGGTCACCG GAAAGACGCT CGAGGAAAAT CTCGCCGAGG CGCCCGCACC GGACGAACGC
GTGATCCGGC CGCTGTCCAA CCCGTTCCGC AACGAGCCCG GGCTCATCAT CATTCGCGGC
AATCTCGCGC CGGACGGCGC GGTGGTGAAG CTGTCCGCCG TCCCGACCTC CGTCCGCCGG
TTCGAGGGCG TGGCGAAGGT TTTCGAAGAC GAGGATAAGG CGATCGCCGG CCTCAGCGAT
GGCTCAATTC ACAAGGGACA GGCCATCATC CTCCGGCACA TGGGCCCGAA GGGCGGCCCG
GGCACGGTGT TCGCGTGCTC GTTCATGGCG GCTCTGGTCG GCGCCGGCCT GTCGAGCGGC
GTCGCGGTTC TGACCGACGG TGAGTTGTCG GGTCTCAACT CCGGCATCAC TGTTGGCCAG
ATCATGCCGG AGGCTGCCGA AGGTGGCCCG CTCGCCGTGG TGGCTGACGG CGACCGTATC
GCGATCGACC TGACCGCCGA AACAATCGAG CTGATGATCA CCGAAAAGGA ACTCGCGACC
AGACTAGCCG AATGGAAACC GCGGACGTTG CCGGCCGAAT ATGGCTGGCT CGCGCAATAC
GCCCAGCTCG TCCAGCCGCT CTCGAAGGGA GCCGTACTCG GCGATCGAAG CCGTCGCTGA
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| Protein sequence | MNELRSNFEP GSTRWAVRRA QWLAMGIKEE DFHKPKIAVV NSSSGLSVCY QHLDDISRKV
QQAIRDAGGL PFEIRTVAPS DFVTSAGRKA RYLMPSRDLL VNDVEVQVEG AELDGMVLLA
SCDKTTPGQL MAAGRLNIPS IVLACGYQLG GHCGGKDVDI EDLYNGVGTY KSGQISLQDL
TDMSCAAIKG PGVCAGLATA NSMHCLAEAL GMALPGNAPI RAGGERLSDY AVQVGQAIVR
LIQQDLRPRQ ILTKASIQNG IRIAQALGLS VNTVRHLTAI AIESRIEMDV VAEYEALSKD
AVQITQVRPN GPHRIEMLDA AGGVRGAMKQ LASKLDLSTM TVTGKTLEEN LAEAPAPDER
VIRPLSNPFR NEPGLIIIRG NLAPDGAVVK LSAVPTSVRR FEGVAKVFED EDKAIAGLSD
GSIHKGQAII LRHMGPKGGP GTVFACSFMA ALVGAGLSSG VAVLTDGELS GLNSGITVGQ
IMPEAAEGGP LAVVADGDRI AIDLTAETIE LMITEKELAT RLAEWKPRTL PAEYGWLAQY
AQLVQPLSKG AVLGDRSRR
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