| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2550 |
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| Symbol | |
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| ID | 6410212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2755981 |
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| End bp | 2758308 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712428 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_001991538 |
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| Protein GI | 192290933 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.182788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCAAC GGGCATTCAC GCGCGAATCC GCACGGAGCC GACTTCTTGC TTCCACCTGC
GGACTGAGCG TCGCGCTGGC CTGCGTGATG ACGGCAGGAT CGAGCACCGC GACGCGGGCT
CAGACTGCCG ACTCGACGAC ACCGCGCGCG CGCCATGTGT TGCCGGAAGT GCGCGTGGAA
TCGGCGAATC CACCGAAGCC GCAACGCGCG GCACGGTCGA GCGACGGCCG CGGTGCACGC
CGCGCCGCGG CGCAAGCGCC AAAGCCCGCG CCCGCTCAGC AGGCCGCAGC AGCGACGTCA
GATAATTCGC TCAAGCCAAT GGGGGGCAAG CTTCCGCAGC CCGGAATTCC GCACGCCGCG
CAGCAGAGCA TCACCGTGGT CGATCGTGCG CAGATCGAAC AGACCAGCCC GACCAGCCTG
CTCGATATCC TGCAGAACGT GCCGGGCGTG TCGATCGCGC GCGCCGGCGG CATCGGCGGT
CAGATCTATC TGCGCGGCTT CTCGTCGAAC AACTGGCGCT CGCCGATGTA TATCGACGGC
GACCGTTTCC GCGGTCGCAA CACGCTGCAG CTCAACTACT TCGCACCCGA AGAGATCGAG
CGGGTCGAGG TGGTGCGCGG ACCCGCCTCG GTGGTGTACG GCTCCGAGGC GATGACCGGG
CTCGTCAACG TCGTCACCCG CCGTCCCCAG GTCGATCCGT TCGGTCCGTG GCGCGTCACC
CATGGCGGGT TCTCGGCCGG CTACAGCTCG GTCGACAACG GCTTCAGCAC TTATGAATGG
GCGCAGGCGG CGGGCATGGG CTTCGATGTG CTCGGCGGCG TCAGCTATCG CAAAGGCGGC
AATTATCAAA CGCCCAGCGG ACCGGCGCTG AACAGCGATT ACGAAAGCAT CGGCGGCAAT
CTGCGGCTGG GCTGGTCACC GACCAGCAAC CAGCGCTTTG AACTGACGCT GCGCGACTAT
TGGGAAGAAG ACGGCCGCGC CGGTGGCGTC GGCGGCGCGC CGGGCTGGCC CTATATGCAG
GTGCGGCAGC AGCCGAACCA GGTGCACATG GCGAAGCTGT CCTATGCCGG CGACTTCACC
GATCAGCTGG TCCAGCATGT CGAAGGCTCG TTCTACGCCA ATTACTTCGA CACCAAGCTC
TCCACGGTGA ACACCGCGAC GCCGGGCGTC GTCACCTCCT CGGTCAGCCA TGTCGGTGGC
CCATTGGTGA TCGGCGGCCG GGTGCAAGGC GTGATTCCGT GGGATCCGGC GCCGTGGGGA
CTGCTCAAGA CGACATTCGG CTTCGACGGC TTCCAGGAAT GGCGTCCCGG CAGCACGTCG
TGGTCGGTGC GGCAGACCGC GACGAGTTCG ACGATCACGC CTGAGTTCAA GACCGGCCCG
GACAACACCC AGGCCAATGC CGGCGCGTTC ATGCTGCACG AGTGGAAGCC GATTGATCTG
CTGACGCTGT CGGCCGGCGG CCGGTTTGAC TGGTTCAACA CCACCTCGGA ACTGTCGCCG
GTGAGTTCGG CGAGAGCCCT CGCGGTGCTT CGGCAGAACA GCGACGTCAC CGCCACCGCC
CCGACCGGCA GCATTGGCGC CACGGTTCAC GTGACGCCGA TCCTCGATCT GCTCGCCTCG
GTGGGCACCT CGTATCGCTA TCCGACCAAT TCCGAGCTGT TCGCGTTCTC AGGCACATCG
ATCCCGAATC CGGAGCTGAA GCCGGAGACC GGTCTCACCT ACGAGGGCGG CTTCCAGCTC
AACTTCCCGA CCGCCACCTT CAAGGTGACG GCGTTCGACA GCCACTACGC GAATTTCCTG
CAGTCGGTGT TCGTCAACTA TAACGGGGCA TCGGTGACGC AGAGCCAGAA CGTCGGCCAT
GCCACCGTGA ACGGCGTCGA AGCCGAATGG CGCTGGCAGG CGACGTCGTC GTTCAACCTG
CACGGCAATG CCGCGTGGCT GCAGGCGACC AACACCGACA CCGATGCGCC GCTGCCGTTC
ATTGCGCCGT GGAAGGGACG TGTCGGCGTG CAATACGCGC CGATCGGCTC CGGCTACGCG
GTCGGTGCCG CGGTGGATTG GGCATCGGCC AAGACCCGCA TCAACACCAC GCAGGAATAC
CCGACTGGTG CCTATGCGGT GCCGAGCATC TACGCCTCGT TCGATCTCGG CGTATTGGTC
TCGCGCCGAC TCGGCGACAC CAAGCTGCAC CTCAGCCTGC AGAACATCTT CGACACCTCC
TATGCGAGCG CGTCGACTTA TGTGAACCGG TCGTACAGCC AGTCGATGTA CAACCCGCTG
CTGGAGCCAG GCCGCAATTT CACCGCCCGG CTCACGCACA CCTTCTGA
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| Protein sequence | MIQRAFTRES ARSRLLASTC GLSVALACVM TAGSSTATRA QTADSTTPRA RHVLPEVRVE
SANPPKPQRA ARSSDGRGAR RAAAQAPKPA PAQQAAAATS DNSLKPMGGK LPQPGIPHAA
QQSITVVDRA QIEQTSPTSL LDILQNVPGV SIARAGGIGG QIYLRGFSSN NWRSPMYIDG
DRFRGRNTLQ LNYFAPEEIE RVEVVRGPAS VVYGSEAMTG LVNVVTRRPQ VDPFGPWRVT
HGGFSAGYSS VDNGFSTYEW AQAAGMGFDV LGGVSYRKGG NYQTPSGPAL NSDYESIGGN
LRLGWSPTSN QRFELTLRDY WEEDGRAGGV GGAPGWPYMQ VRQQPNQVHM AKLSYAGDFT
DQLVQHVEGS FYANYFDTKL STVNTATPGV VTSSVSHVGG PLVIGGRVQG VIPWDPAPWG
LLKTTFGFDG FQEWRPGSTS WSVRQTATSS TITPEFKTGP DNTQANAGAF MLHEWKPIDL
LTLSAGGRFD WFNTTSELSP VSSARALAVL RQNSDVTATA PTGSIGATVH VTPILDLLAS
VGTSYRYPTN SELFAFSGTS IPNPELKPET GLTYEGGFQL NFPTATFKVT AFDSHYANFL
QSVFVNYNGA SVTQSQNVGH ATVNGVEAEW RWQATSSFNL HGNAAWLQAT NTDTDAPLPF
IAPWKGRVGV QYAPIGSGYA VGAAVDWASA KTRINTTQEY PTGAYAVPSI YASFDLGVLV
SRRLGDTKLH LSLQNIFDTS YASASTYVNR SYSQSMYNPL LEPGRNFTAR LTHTF
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