Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2420 |
Symbol | |
ID | 6410082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2607655 |
End bp | 2608512 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 642712299 |
Product | TonB family protein |
Protein accession | YP_001991409 |
Protein GI | 192290804 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAACGCCC GCGCGCTGCA CGACAGCGGG GCGGCGCAGG GCGCGTCGCG GTGGCTGCTG TCGGCGGCGA TCATCGTCGG CGTGCATGCC GCCGCAGTCG CAGCCGCGCT GGCCTACTAC ACGCAGGTGC CGCCGCCCGG CGAGCCGTTG GCTGCGATCA TGATCGATCT GGCGCCGATG ACGGCGTCGC CGCAGCCGAG CCCGCTCGAT CTGCCGCCGG GACCGGAGAT GCAGGAGGCC GAGGCGCCGC AGGCGGAGCC CGAGCCGGTG CAGCACACCG CCGCAGCGCC CGAGATCGCG CCAACGCCCA TCCAGCAGGC GGCTGAGGTG CCGTTGCCGC CGGACGCCAA GCCTTCGCCG ACACCGGACA TGCCCGAGCC CGTGAAGCTG GAGCAGGCCG AGCCGGTGAA GCCGAAGCCG GAGCGCCCGA AGCCGATCAA GCGGGAGCGC GTTGCCAAGC AGAATCCGTC CGACCGGCCG CCGGCGCCGC GAACCAGCGC GCCGCAACGC GCTGAACGCC GCGCCGCCGA TGCGATGGCG GCGCTCGCCG GAGCCCAGGC GGCAGCCGCG ATGCTGCCGA GCTATCGCCA GCGCCTGGCG GCGCATCTGC AGCGCTTCAA GCGCTATCCG ACGGAGGCCC GCGCCAGCGG CGTGCAGGGC ACCGCGACCT TGAGCTTCAC CGTCGGCCGC GGCGGGCAGG TGTTGAGTGC AAGGCTGGCG CGCTCATCCG GCCATCCGGC GCTCGATGCT GAAACGCTGG CGATGGTCAG CCGAGCCCAG CCGCTGCCGC CATTCCCTCC GGAGATCACG CAGGCGTCGC TGAACTTCAG CGTGCCGGTT AATTTCTCCG TCAGGTAG
|
Protein sequence | MNARALHDSG AAQGASRWLL SAAIIVGVHA AAVAAALAYY TQVPPPGEPL AAIMIDLAPM TASPQPSPLD LPPGPEMQEA EAPQAEPEPV QHTAAAPEIA PTPIQQAAEV PLPPDAKPSP TPDMPEPVKL EQAEPVKPKP ERPKPIKRER VAKQNPSDRP PAPRTSAPQR AERRAADAMA ALAGAQAAAA MLPSYRQRLA AHLQRFKRYP TEARASGVQG TATLSFTVGR GGQVLSARLA RSSGHPALDA ETLAMVSRAQ PLPPFPPEIT QASLNFSVPV NFSVR
|
| |