Gene Rpal_2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2393 
Symbol 
ID6410055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2578413 
End bp2578838 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content66% 
IMG OID642712272 
ProductDoxX family protein 
Protein accessionYP_001991382 
Protein GI192290777 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.563598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGTCGG CGGGCGAACC GCGGTGGGTG GTGCCGATTT TGGCGTCGCC GCTGCTGTGG 
CATGCCGCGC GCTTCGCACT GGTGTCCGCC TATCTGCTCG GCGGCGTGGT GAAGCTGTTC
GATTTCGCCG CCGCGGTGGC CGAGCAGGAA AGGTTCGGCC TTCATCCCGG CTGGCTGTGG
GCAACGCTCG CGATCGTCGT CGAGCTCGGC GGTTCGCTGC TGGTGCTGGC CGATCGGCTG
GTCTGGCTCG GTGCCGGCGC GCTTGGCGTC CTGACCTTCG TGGCGATGCT TACGGCGAAT
GCGTTCTGGT CCGCGCCCGC AGCAGATCGT TGGATACAGG CCAACGCCTT CTTCGAACAT
TTCGGACTGA TCGCTGGCTT CGTGCTTCTG GCGATGCTGT CTGACCAGCG GCGATCGACA
TCCTGA
 
Protein sequence
MRSAGEPRWV VPILASPLLW HAARFALVSA YLLGGVVKLF DFAAAVAEQE RFGLHPGWLW 
ATLAIVVELG GSLLVLADRL VWLGAGALGV LTFVAMLTAN AFWSAPAADR WIQANAFFEH
FGLIAGFVLL AMLSDQRRST S