Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2371 |
Symbol | |
ID | 6410033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2556153 |
End bp | 2557085 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642712250 |
Product | periplasmic binding protein |
Protein accession | YP_001991360 |
Protein GI | 192290755 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACCAGAA CAGCTGCGCC GCGTCACGGC GCTCGTGCGT CCGTCGCTTC GAATGAGCGG CGGTTGTGCC GTTGGCGTTC CCGCTTGTTG CTGATGATCA CCGCGGTTGG CCTGCTGGCG TCGCCGGCGG TTGCGGCGCC GAAGCGGATA GCCTCGATCA ATATGTGCAC CGACCAGCTT TTGATAGCGT TGGCCGATCC GGAGCAGATC GTTGGGCTTG GGCCCTATGC GCGTGACCCG CGGCTGTCGT GGCTGGCGCA GGAGGCCGAG CGGTTTCCCA AGCTGTCCGG TGAGGCAGAG GATCTGTTGA TGCTGGCGCC CGACGTGGTG CTGGCCGGCC GCTATGGCAA GCGTGCCACC CGCGAACTGC TGCGCGCGCA GAACATTCCG CTCGAGGAGT TCGACGTGCC GCGGACGATC GACGAGGTCA AAGCGCAGAT CCTGCGGACC GGCGAGCTCG TCGGCCATCC CGAGCGATCG GATGCCATGA TCGCTGCGAT CGACAAGGCC GCGCTGCGCG CGCGGCAGAC CGCGTCACGG TGGCACGGCC GGGTACTGGC GCTGTCGCGG CGAGGCTGGG TGACCGGCGG CGACAGCCTG CTCAGCTCAG TGCTGCAGAC CGTCGGGCTG TCGAACTCCG CTTCCGATCT CGGATTCGCC TATGGCGGCT TTGCCTCGCT CGAAGCCATC GTGGCATCGC GGCCGGATCT GTTGCTGGTG TCCGAAGAGC AGCCGGTGGC TGAGGATCAG GGCAAGGCTC TGCTGCTGCA TCCCGCAATC CAGCAGTCCT ATCCGGCCAG CCGCCGCATC GTCATTCCGG ATCAGCTCAC GGTCTGTGGC GGCGCAATGC TGCCGGTTGC GCTCGACCGG CTATCCGATG CGATCGAGCA GATCAGCCAG AGGCGAGGCG TTGCGGCCGC CGAGACGCGG TAG
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Protein sequence | MTRTAAPRHG ARASVASNER RLCRWRSRLL LMITAVGLLA SPAVAAPKRI ASINMCTDQL LIALADPEQI VGLGPYARDP RLSWLAQEAE RFPKLSGEAE DLLMLAPDVV LAGRYGKRAT RELLRAQNIP LEEFDVPRTI DEVKAQILRT GELVGHPERS DAMIAAIDKA ALRARQTASR WHGRVLALSR RGWVTGGDSL LSSVLQTVGL SNSASDLGFA YGGFASLEAI VASRPDLLLV SEEQPVAEDQ GKALLLHPAI QQSYPASRRI VIPDQLTVCG GAMLPVALDR LSDAIEQISQ RRGVAAAETR
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