Gene Rpal_2371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2371 
Symbol 
ID6410033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2556153 
End bp2557085 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content67% 
IMG OID642712250 
Productperiplasmic binding protein 
Protein accessionYP_001991360 
Protein GI192290755 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCAGAA CAGCTGCGCC GCGTCACGGC GCTCGTGCGT CCGTCGCTTC GAATGAGCGG 
CGGTTGTGCC GTTGGCGTTC CCGCTTGTTG CTGATGATCA CCGCGGTTGG CCTGCTGGCG
TCGCCGGCGG TTGCGGCGCC GAAGCGGATA GCCTCGATCA ATATGTGCAC CGACCAGCTT
TTGATAGCGT TGGCCGATCC GGAGCAGATC GTTGGGCTTG GGCCCTATGC GCGTGACCCG
CGGCTGTCGT GGCTGGCGCA GGAGGCCGAG CGGTTTCCCA AGCTGTCCGG TGAGGCAGAG
GATCTGTTGA TGCTGGCGCC CGACGTGGTG CTGGCCGGCC GCTATGGCAA GCGTGCCACC
CGCGAACTGC TGCGCGCGCA GAACATTCCG CTCGAGGAGT TCGACGTGCC GCGGACGATC
GACGAGGTCA AAGCGCAGAT CCTGCGGACC GGCGAGCTCG TCGGCCATCC CGAGCGATCG
GATGCCATGA TCGCTGCGAT CGACAAGGCC GCGCTGCGCG CGCGGCAGAC CGCGTCACGG
TGGCACGGCC GGGTACTGGC GCTGTCGCGG CGAGGCTGGG TGACCGGCGG CGACAGCCTG
CTCAGCTCAG TGCTGCAGAC CGTCGGGCTG TCGAACTCCG CTTCCGATCT CGGATTCGCC
TATGGCGGCT TTGCCTCGCT CGAAGCCATC GTGGCATCGC GGCCGGATCT GTTGCTGGTG
TCCGAAGAGC AGCCGGTGGC TGAGGATCAG GGCAAGGCTC TGCTGCTGCA TCCCGCAATC
CAGCAGTCCT ATCCGGCCAG CCGCCGCATC GTCATTCCGG ATCAGCTCAC GGTCTGTGGC
GGCGCAATGC TGCCGGTTGC GCTCGACCGG CTATCCGATG CGATCGAGCA GATCAGCCAG
AGGCGAGGCG TTGCGGCCGC CGAGACGCGG TAG
 
Protein sequence
MTRTAAPRHG ARASVASNER RLCRWRSRLL LMITAVGLLA SPAVAAPKRI ASINMCTDQL 
LIALADPEQI VGLGPYARDP RLSWLAQEAE RFPKLSGEAE DLLMLAPDVV LAGRYGKRAT
RELLRAQNIP LEEFDVPRTI DEVKAQILRT GELVGHPERS DAMIAAIDKA ALRARQTASR
WHGRVLALSR RGWVTGGDSL LSSVLQTVGL SNSASDLGFA YGGFASLEAI VASRPDLLLV
SEEQPVAEDQ GKALLLHPAI QQSYPASRRI VIPDQLTVCG GAMLPVALDR LSDAIEQISQ
RRGVAAAETR