Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2366 |
Symbol | |
ID | 6410028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2552147 |
End bp | 2552824 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642712246 |
Product | signal transduction histidine kinase |
Protein accession | YP_001991356 |
Protein GI | 192290751 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.152305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGACCG ATGACACCAA CAGCCGGATA GCCGAACTCG AGGCCGACAA TCGCCGCCTG CGGCAACTGC TCGACAAGCG TGATGCCCCC GGCGAGCTCC GCCATCGGCT GCGCAGCACC GTGGCTATGC TGCGGACCAT CATCCGAAAG TCCGCCAGCA AACGTCACAG TCTCGATACC TATGTGGGAC ACCTCGAGGA TCGTCTCGAC GCCTTGATGC GCGCCCAAGC GATCGCCGAC GAACAGGGCG CGATCGACTT CCACAAGCTA CTGGCCGATG AACTCCTGCA CTATCAGGCG CGCGACGGTG AGCGGGTCAC GTTTGCCGGC CCCGACCTGC ATCTGCAGGC CCGGGCCGGA CAGGTGCTTG CACTCGCCGT GCATGAACTC GCCGTCAATG CCGTCGAGCA CGGTGCCCTG GGCGGCGACG GGACCATCGA GATCCGTTGG AGCGTCGCAA GCGACGGCCC GGCGCCGATG CTGACCTTCG TCTGGAAGGA AACCGAAACC GCTCCCGTTG CCGAACCATC CCATCACGGC TTCGGCACCG AGGTCCTGAC GCGCACGCTC GAATACGAAC TGAAAGCGAA GACCGACCTT GCCTTCGAAC CCGACGGCCT TCGCTGCACG ATCCGTTTTC CGCTGTCGGA GCGGGTCGAC GGAAGCCAAG CTGGCTGA
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Protein sequence | MPTDDTNSRI AELEADNRRL RQLLDKRDAP GELRHRLRST VAMLRTIIRK SASKRHSLDT YVGHLEDRLD ALMRAQAIAD EQGAIDFHKL LADELLHYQA RDGERVTFAG PDLHLQARAG QVLALAVHEL AVNAVEHGAL GGDGTIEIRW SVASDGPAPM LTFVWKETET APVAEPSHHG FGTEVLTRTL EYELKAKTDL AFEPDGLRCT IRFPLSERVD GSQAG
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