| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2227 |
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| Symbol | |
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| ID | 6409887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2415894 |
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| End bp | 2417852 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712111 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_001991223 |
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| Protein GI | 192290618 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1032] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTTC CAAGGCGTGC CCGTGGTGAC GAACTCCTGG TTCCCGGCAA GATGGCCAGC
TTGCGAGCGC GATTGCGCCG GCTGTCGGGG CAGCATGACC TGACGACCGT CATCGTCAAC
GCCTTCGATC ATCGCACCCG AGTCCTGCCC TTTGTTCTCG CAGATACCCG TATGGCGCCC
GGCGGCGTCC GGGCGATTGG GGCGGCGCTC GCCGATGTCG GTTTCGACAA GACCCGGATC
GTGCTGCAGC AGTGGAACCG GAACTTCAGC CCGCTGCAAA TGCGACTCGA CGGCCGGATT
CCGGACCTGT TCCTGGTCTC CAGCATGCAT CTGCATTCGG CCGAGTGCGA TCGCCTGATT
CGCGAGGCCT GCCAGATCGA TCCGGACAAG CGCCCCCTGA TCATGGTCGG CGGTCCCCGC
ATTCGCTACG AGCCTTGGCA TGTGTTTGGC GGCACTCGCG ATGCGACATG GTCCGCCGAT
GTCGCCGTCA CCGGCGAGGA ATACGTCTTC CTCGAACTGC TGGACGTGCT GCTGTCGATG
CGCGCGCCCG GCGAGTCGAT GCGCTCGGTG TTCCAGCGGG CCCGCGATGA CGGCGCACTC
GACGAGGTGC CGGGGATCGT CTATGCGCGC CGCTCCTCGC GGAGCGGTCC GATTGAAGAG
CTGGTCGATA CCGGCGTACA GCGCCTGCTC GGCGATCTCG ACGAGCTACC CGACCCGGTG
CACGGCTACA AACTGCTGGA GGCCCCGAGC AACAGTGCGA CGCTAGCGAG CCAGGCGCTG
CCGATCAACC GGGTGAAGCG CCATAGCCCG ATCGCCAGCA TCGTGATGAC CGCGGGCTGC
AAGTTCCGCT GCTCGTACTG CCCGATCCCG GCCTACAACC AGTCCCAATT CCGCGCCAAG
AGCGGCGAGC GGATCGCCGA GGAGATCGGG CAGATCGCCA GCACCTTCGG CATCTATCAC
TTCTTCGGCG CCGACGATAA CTTCTTCAAC GACACCAAGC GCACGCTGGA CATCGCCGGC
ACGCTGGCGC GCAAGCGCTC CGAACGGCCG TTCTGCAAGG TGCGGCTCGG CACCGAAGTC
ACGGTGCACG ACACCGTCGG GATGCGCGAT CACCTGCCGC TGATCCGCGA TGCGGGCTTT
GCGGCGGTCT GGCTCGGCGT CGAGGATATG ACCGCGACGC TGGTGAAGAA GGCGCAGGAC
AAGGACAAGA CCCAGCTCGC CTTCAAGCTG CTGCGCGAAA ACAACATCCT GCCGATGCCG
ATGATGATGC ATCACGACAG CCAGCCGTTG GTGACCTGGA AATCGAACTA CGGCCTGATC
AACCAAATCA GGCTGCTGCG CAAGGCCGGC TCGATCAGCA CGCAGGTGAT GATGCTGACC
CCTGCCCCCG GTTCGAAGTG GTACGAGAAC GTGTTCGAAT CCGGCATGGC GTTCAGCCGC
GCCGGCGACA TCAAGGTCGA GCCGCATATC ATGGACGGCA ACTACGTCGT CGCCTCGAAG
CACCCGCGGC CCTGGCTGAA GCAGCTCAAT CTGCTGCTTG CCTACACCTA CTTCTTCAAT
CCGATCCGCT TCCTCAGCGC GCTGGTGTTC TCCAAATCGG CCGACGTGTT CTCGAGCGCC
GAAACCCGCC CCGCCCACGA GGTCGCGCAT TTCTCACCGG CCAAGCGAAT GCGGCGTCGA
GCCTGGCTGA AGTTCCGCGC CCACATCGTT GATGCTGGCG CGCAGATCTA CGGCATGATC
GGGCTCGCCC ACACCTACCG GCGAACTGCC GGCTGGGCGT GGCGGCTACT CCGCGGTGAC
ATCGAGCGGC ACGACCGCGC CCCGGTCAGC CCGATCCCGA TGCGGGGCGT CGGCGACAAG
CCATCCGATC ACGCGCTGCC GGGAACGGTC GATCTACGGG ATCTCGAGCA GGTTGCTCTC
CACGGCGCGC CAGCGCCGAA ACTGGCGAAG ACCGCCTGA
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| Protein sequence | MELPRRARGD ELLVPGKMAS LRARLRRLSG QHDLTTVIVN AFDHRTRVLP FVLADTRMAP
GGVRAIGAAL ADVGFDKTRI VLQQWNRNFS PLQMRLDGRI PDLFLVSSMH LHSAECDRLI
REACQIDPDK RPLIMVGGPR IRYEPWHVFG GTRDATWSAD VAVTGEEYVF LELLDVLLSM
RAPGESMRSV FQRARDDGAL DEVPGIVYAR RSSRSGPIEE LVDTGVQRLL GDLDELPDPV
HGYKLLEAPS NSATLASQAL PINRVKRHSP IASIVMTAGC KFRCSYCPIP AYNQSQFRAK
SGERIAEEIG QIASTFGIYH FFGADDNFFN DTKRTLDIAG TLARKRSERP FCKVRLGTEV
TVHDTVGMRD HLPLIRDAGF AAVWLGVEDM TATLVKKAQD KDKTQLAFKL LRENNILPMP
MMMHHDSQPL VTWKSNYGLI NQIRLLRKAG SISTQVMMLT PAPGSKWYEN VFESGMAFSR
AGDIKVEPHI MDGNYVVASK HPRPWLKQLN LLLAYTYFFN PIRFLSALVF SKSADVFSSA
ETRPAHEVAH FSPAKRMRRR AWLKFRAHIV DAGAQIYGMI GLAHTYRRTA GWAWRLLRGD
IERHDRAPVS PIPMRGVGDK PSDHALPGTV DLRDLEQVAL HGAPAPKLAK TA
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