| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2206 |
|---|
| Symbol | |
|---|
| ID | 6409866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 2391005 |
|---|
| End bp | 2392174 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642712090 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001991202 |
|---|
| Protein GI | 192290597 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACA TGTTCGATAA CGCCACCCGT TTCCGCTGGC TGGCCGGCGC CTTGATCGTC
GCCGCCACGT CGCTGTCCTC CGCAGCGTCC GCCCAGCAAG GCTATCCGTC GTCGCAGGGC
TACAATCCGC CGGGCTATCA GCAGGCTCCC CCCGCCGGCC AACCGGGCGC TCCCGCCGCC
AATCCGATGT GCCCGCGGCT GGAAGCGCAG CTCGCCTCGA TCGACCGCGG CAGCATGGAC
CCGGCCCGCG CCGACCAGAT CCGCCGCTTC GAAGACGCCG CCGCCCGCCA ACAGGCCGAG
CTCGACCGCG TCAGCATGCA GGCGAAGCGG ATGGGCTGCG AAAGCTCCGG GTTCTTCTCG
CTGTTCAGCG GCCAGTCGGC GCAATGCGGT CCGGTCAACA GCCAGATCCA GCAGATGCGC
GGCAATCTCG ACCAGATGAA TTCGTCGCTG GAGCGGCTGC GCAGCGGCGG CCCGGGCGGC
AACGACCGCG AAAGCCAGCG CCGCTCGGTG ATCCTGGCGC TGGCGCAGAA CAATTGCGGC
CCGCAATACG CCGCGGCCGC GCAGCAGAGC GGCGGCCTGC TCAATAATCT GTTCAACGGC
GGCAACGCCG GTGCCCCCGG CGTCGGCATG CCGGGCACCG ACTACGGCAA CACCGAGGGC
GGCACCTACC GCACCGTCTG CGTCCGCACC TGCGACGGCT ATTACTTCCC GATCTCGTTC
GCCACCGTGC CGAGCCGGTT CGGCGACGAC GAGCGAACCT GCAAGAGCCT GTGCCCCGCG
TCCGAAGCGT CGCTGTACGC GTACCGCAAT CCCGGCCAGG ACATGAACCA GGCGGTGTCG
ATCAACGGCC AGTCCTACAC CGCGCTGCCG AACGCATTCC GCTATCGCCA GGAGTTCAAC
CCGTCCTGCA CCTGCAAGCC GGCGAACCAG ACCTGGGCCG ATGCGATGAA GGGCGTCGAC
GATCGCTCGG CCGCCGAGCA CGGCGACATC ATCGTCACCG AAGAGAGCGC CAAGCGCATG
GCGCAGCCGC CCGCGCAGCG CGCCGCCGCC AAGAACGGCG CCAAGGCCGC CCCGGCGACC
AACACGCCGG CCTCCCCGCC TGCGGCCGCG TCGAACGACC CCGGCAAGAT CCGCAGCGTC
GGCCCGACCT TCCTGCCGAA GGCGCAGTAA
|
|---|
| Protein sequence | MPDMFDNATR FRWLAGALIV AATSLSSAAS AQQGYPSSQG YNPPGYQQAP PAGQPGAPAA
NPMCPRLEAQ LASIDRGSMD PARADQIRRF EDAAARQQAE LDRVSMQAKR MGCESSGFFS
LFSGQSAQCG PVNSQIQQMR GNLDQMNSSL ERLRSGGPGG NDRESQRRSV ILALAQNNCG
PQYAAAAQQS GGLLNNLFNG GNAGAPGVGM PGTDYGNTEG GTYRTVCVRT CDGYYFPISF
ATVPSRFGDD ERTCKSLCPA SEASLYAYRN PGQDMNQAVS INGQSYTALP NAFRYRQEFN
PSCTCKPANQ TWADAMKGVD DRSAAEHGDI IVTEESAKRM AQPPAQRAAA KNGAKAAPAT
NTPASPPAAA SNDPGKIRSV GPTFLPKAQ
|
|---|
| |