| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2201 |
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| Symbol | |
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| ID | 6409861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2384437 |
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| End bp | 2385444 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642712085 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001991197 |
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| Protein GI | 192290592 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGCCC GTGGCGCCGA CGTTCATGCC AACCCGCTCA GTTCTTTTCG CCATGTGAAG
ACGGGAAGCA TCGAACTTCT GGAGCACGAG CTTGGTCGTT TTTATCCGGG CATCCGGTTT
GAATTGGACA ATCCCGACGG CGCACTCAAT GCGGAGGCCA GTCGATGTGA ATTGAGCGAT
ATTGCTCTGA CCTATGGACG GCACGGCACC GGCATCACCA TCGACGTCCC GTACAACAAC
ACGCATTCGC TGGTGTTCGC CTACGCCGGC AGCGCTGAAG CCCGCACGGG CCGACTCCGC
TCAGACATCG CGGGGCACCG CGCCTTCGTT GCCTCCGCAA CTCGGCCGGT GACGCTCAAA
TACGCGCCGG ATTTCGAGCA GCTCATTCTG AACGTTTCAC AGCGGTCGGT CACAACCAAC
CTCGAGGCGC TGATCGGCGC CCCGCTCAGT CAACCGATCA TCTTCAAGCC CACTTCGAAT
CTTCGGCGCA CGTCGGCGCG CAGGCTGTGG GAGCAGTTGA TGTCTCTCGT CGAGCGGCTG
GGCCGACACG ACGGTGGGTA TCATCAGCAA ATCACGACCG AGCTCGAGCA GGCGATCATC
CTGTCTTTCC TGACCGCCAA TGAGAGCAAC TACACTCCAT TGCTGATGAG CGAGGCCGCC
GCTGCCGGCA GGCGGCCGGT CCATAAGGTG GCGGACTATC TCGAGGCATA CTGGGACCAG
CCGCTGACAG TGGAGATGCT GGCGCGGGTG AGCGGAGTGA GCGTACGGAC TCTCTTCCAC
AGTTTCCGCG GGCAGTTCGG CTATTCCCCG ATGGAGTTCG TCAGGCGCAT TCGTCTTGAA
CGGGCCCGCC AGATGCTGGC CGGCGCCGAT CCGGCGCTTT CGGTGACATC GGTCGCGCTC
TCCTGCGGCT TTGGCAATCT TGGTCACTTC GCGGGCTATT ATAAGAAGGC GTTCGGCGAA
GCGCCGTCGG CCACGCTGTC GCGCGCCAGG AGCCCTGCAT CGTCCTGA
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| Protein sequence | MHARGADVHA NPLSSFRHVK TGSIELLEHE LGRFYPGIRF ELDNPDGALN AEASRCELSD
IALTYGRHGT GITIDVPYNN THSLVFAYAG SAEARTGRLR SDIAGHRAFV ASATRPVTLK
YAPDFEQLIL NVSQRSVTTN LEALIGAPLS QPIIFKPTSN LRRTSARRLW EQLMSLVERL
GRHDGGYHQQ ITTELEQAII LSFLTANESN YTPLLMSEAA AAGRRPVHKV ADYLEAYWDQ
PLTVEMLARV SGVSVRTLFH SFRGQFGYSP MEFVRRIRLE RARQMLAGAD PALSVTSVAL
SCGFGNLGHF AGYYKKAFGE APSATLSRAR SPASS
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