| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2168 |
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| Symbol | |
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| ID | 6409828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2346961 |
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| End bp | 2347977 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712052 |
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| Product | Luciferase-like monooxygenase |
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| Protein accession | YP_001991164 |
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| Protein GI | 192290559 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.319006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGA TCGGTTTTCT CTCGTTCGGC CATTGGTCGC CGCAGTCACG CACGCGTTCG
GCCGCCGATG CGCTGCTCGA AACCATCGAT CTGGCGCAAG CCGCCGAACA GCTCGGCGCC
GATGGCGCCT ATGTCCGCGT GCATCATTTC GCCCGGCAAC TCGCCTCGCC GTTCCCGCTG
CTCGCCGCGA TCGGTGCCAG AACCAAGCGC ATCGAGATCG GCACCGCCGT GATCGACATG
CGCTACGAGA ATCCGCTGTA CATGGCCGAG GACGCCGGCG CCGCCGATCT CATCTCCGGC
GGCCGGCTGC AGCTCGGCAT CAGCCGCGGC TCGCCCGAGC AGGTGATCGA TGGCTGGCGC
TATTTCGGCT ATCAGCCGGC CGAGGGCGAA AGCGACGCCG ACATGGGCCG CCGCCACGCC
GAAGTGCTGC TCGACCTGCT GCGCGGCCAG GGCTTCGCGC AGCCCAACCC GCGGCCGATG
TTTCCCAATC CGCCGGGGCT GCTGCGGCTC GAGCCGTATT CGCAAGGCCT GCGCGACCGG
ATCTGGTGGG GCGCGGGCTC AAACGCGACC GCGCAGTGGG CCGCCAAGCT CGGCATGAAC
CTGCAGAGCT CGACGCTGAA GAACGACGAG ACTGGCGAGC CGTTTCACGT TCAGCAGGCG
GCGCAGATCC GCGCCTATCG CGAAGCCTGG AAAGAGGCCG GCCACACCCG CGCGCCGCGC
GTCTCGGTCA GCCGCAGCAT CTTCCCGCTG GTCGACGATC GCGACCGCGC CTATTTCGGC
CGCGAAGGCC AGCAGCAGGA TCAGATCGGC TATCTCGACG AACAGACCCG CGCGATTTTC
GGCCGCTCTT ACGCCGCCGA GCCGGATGCG CTGATCGAAC AGCTCAAGGC TGACGAGGCG
ATCGCCGAGG CCGACACGCT GTTGCTGACG ATCCCCAATC AGCTCGGCGT CGATTACAAC
GCCCATGTGA TCGAGGCCAT CCTCACCCAC ATCGCGCCGG CGCTCGGCTG GCGCTGA
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| Protein sequence | MKKIGFLSFG HWSPQSRTRS AADALLETID LAQAAEQLGA DGAYVRVHHF ARQLASPFPL
LAAIGARTKR IEIGTAVIDM RYENPLYMAE DAGAADLISG GRLQLGISRG SPEQVIDGWR
YFGYQPAEGE SDADMGRRHA EVLLDLLRGQ GFAQPNPRPM FPNPPGLLRL EPYSQGLRDR
IWWGAGSNAT AQWAAKLGMN LQSSTLKNDE TGEPFHVQQA AQIRAYREAW KEAGHTRAPR
VSVSRSIFPL VDDRDRAYFG REGQQQDQIG YLDEQTRAIF GRSYAAEPDA LIEQLKADEA
IAEADTLLLT IPNQLGVDYN AHVIEAILTH IAPALGWR
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