| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2128 |
|---|
| Symbol | |
|---|
| ID | 6409788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 2296880 |
|---|
| End bp | 2297344 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642712013 |
|---|
| Product | LipA a lipoprotein |
|---|
| Protein accession | YP_001991125 |
|---|
| Protein GI | 192290520 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4520] Surface antigen |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.366844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGA CGTCTTGGGG GGTGAAGCCG CTGTTGCTGC TCACCGGCGC GCTGGCGCTG
GCTGGGTGCG ATCGCACGTC CGGGCTGGTG GCCCGGGTGG ATTCCTTCAC CAGCACCGCG
ACCTCGGATT TCGGCCGCAA TGACGGCAGC GCCGCGGTCG ATGCCGCCGC AATGGGCGGC
CTGATCGGGC CGAAGATCGG CGCGCTGCTC AATGCCGAAG ACCGCCGGCT GGCCTATGCG
GCCGAGCTGG AAGCGCTCGA TCGTGGCGAA TCCGGAGCCC CGGTGGCGTG GAAGAACGCG
TCCTCAGGCC GCTACGGCAA CATCGTGCCC GGGCCGGTCT ATATGAAGCA GGGCGCTACC
TGCCGCGGCT ACTCGCACGC GGTGACGATC GGCCAGCAGA TCGAGATTTC CCGCGGCACC
GCCTGCCGTG TCCAGGACGG TGCCCCCTGG ACGGCGCAAG GCTGA
|
|---|
| Protein sequence | MTMTSWGVKP LLLLTGALAL AGCDRTSGLV ARVDSFTSTA TSDFGRNDGS AAVDAAAMGG
LIGPKIGALL NAEDRRLAYA AELEALDRGE SGAPVAWKNA SSGRYGNIVP GPVYMKQGAT
CRGYSHAVTI GQQIEISRGT ACRVQDGAPW TAQG
|
|---|
| |