Gene Rpal_2121 details

Gene Information

• Locus tag: Rpal_2121
• ID: 6409781
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 2287089
• End bp: 2287634
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 642712006
• Product: cytochrome B561
• Protein accession: YP_001991118
• Protein GI: 192290513
• COG category: [C] Energy production and conversion
• COG ID: [COG3038] Cytochrome B561

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0436144
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCTGC ATAGCTCATC CGATCAATAC GGCAGTGTCG CCGTGGCGAT CCATTGGCTC 
ACCGCCGTCC TGATCGTGAT CGCGCTGTTG ACCGGCTTCC GTGCCGCGGC GGCCGATGAC 
GTCGCGACCG AGGCGGCGCT GCTCCGGGTG CATCTGCCGG CCGCGGCGCT GGTGCTGGTG 
CTCACCGTCG TGCGGGTGGT GTGGTGGCTC GGCATCGACG ACAAGCCCGA ACCGATCGAC 
GGCGCGCCGC GCTCGCAGCA GTTAATCGCT GGCGCGGTGC ATCTGTTGTT CTACGTGGTG 
GTGTTCGGCA TGATCGCGAG CGGCATCGGC ATGATGCTGG CGAGCGGTGC GGCGCCGGCG 
ATCTTCTCGC GCGACGTCAC GGCGCTGCCG GAGTTCTGGC ACTACCGGCC GCGTATCCCG 
CACGGGTTGG GCGCGCGGCT GCTGGTGCTG CTGCTGATCG CGCATCTTGC GGCGGCGCTG 
TATCACCATT TGCGCGGCGA CCGCGTGTTC CGCCGGATGT GGTTCGGCCG CAATCCGAAA 
CCTTAA 

 

Protein sequence

MALHSSSDQY GSVAVAIHWL TAVLIVIALL TGFRAAAADD VATEAALLRV HLPAAALVLV 
LTVVRVVWWL GIDDKPEPID GAPRSQQLIA GAVHLLFYVV VFGMIASGIG MMLASGAAPA 
IFSRDVTALP EFWHYRPRIP HGLGARLLVL LLIAHLAAAL YHHLRGDRVF RRMWFGRNPK 
P