Gene Rpal_2050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2050 
Symbol 
ID6409710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp2222969 
End bp2223703 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content66% 
IMG OID642711936 
Producthypothetical protein 
Protein accessionYP_001991048 
Protein GI192290443 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGC TCTCTCTCTC GATCGTTGCG CTGCTCGGCG CCGTCGTGCC AGCGCAGGCG 
CATCAGATCT GGATCGAGCA GGCGGATGGC CAGGCTGTGG TACGGTTCGG CGAGTTCGGC 
GAAAATCTGC GCGAAGCCTC GCCCGGACTG CTCGACAAAT TCGCCAAGGT CACCGGCACG 
CTGCTGTCGG CCAAGGGTGA GCAGAAGGCG GAGGCGAGCA AGACCGCGAG CGGGTTCAAG 
CTGCCGTTCA CCGCTGTGGC CGGTGACAGC CTCGTGGCCG AGGACGCGAA CTATCCACTG 
TACACCTGGA AGCAGCAGGA TAAGGACGTG CGGAATTGGT TCTATCCGGC GGCGCGGCTG 
ATCACTGGTT TTGCCGCGCA GCAGCCGAAG CTGGTGCTCG ACCTGGTGCC GACCGGGCAG 
CCCGGCCAGT TCAAGCTGGT GTTCAAGGAT CAGCCGAAGC CCAAGACCAA GGTCACGCTG 
ACGACGCAGT CGGGCTGGGC CAAGGAAGCG CACACCGACG CGCAGGGGCT GGTGAGCTTC 
GACATGCCGT GGAAGGGCGT GTACGTCGCC GAAGTCAGCC TCAACGACAA GACTGCTGGC 
GAGCGCAGCG GCCCCAAGGG GGCGGAGCCC TATGATGCGG TGAGCTACGC CACCACGGTC 
ACTTACGAGA AGGCCGACGG CCTGCCGCCG CTTCCGCCCG GTCCGCCGGC GACGCCGGCC 
GCACCGAGCA AATGA
 
Protein sequence
MNKLSLSIVA LLGAVVPAQA HQIWIEQADG QAVVRFGEFG ENLREASPGL LDKFAKVTGT 
LLSAKGEQKA EASKTASGFK LPFTAVAGDS LVAEDANYPL YTWKQQDKDV RNWFYPAARL 
ITGFAAQQPK LVLDLVPTGQ PGQFKLVFKD QPKPKTKVTL TTQSGWAKEA HTDAQGLVSF 
DMPWKGVYVA EVSLNDKTAG ERSGPKGAEP YDAVSYATTV TYEKADGLPP LPPGPPATPA 
APSK