Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1995 |
Symbol | |
ID | 6409655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2157281 |
End bp | 2158321 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642711881 |
Product | inner-membrane translocator |
Protein accession | YP_001990993 |
Protein GI | 192290388 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACACCA CGATTCTGCT GTTCCTTGTT CAGGACGGTA TCACCAACGG CGCGATCTAC GCACTGCTGG GGCTGGCGCT GGTGCTGGTC TTTGCGGTCA CCCGGGTGAT CCTGATCCCC CAGGGTGAAT TCATCACATT CGGCGCTCTC ACCTACGCAA CGCTGTCGGC CGGCGGCGTG CCGGGCACCG CGCAGCTTGC GCTGGTAATG GGCCTGGTGG CGTTCGCCTT CGAGCTGTTC AGCGCCCGCA AATCGCTGCA TGTCGCCAAA GTGATGCGCG CGGCGCTGAT CTACATCGCC TTCCCGGCGA TCGTGCTGGC GCTGGCGACC TGGCTGCCGG CGCATAAGCC GGGCGTCGCC GTCAACATCG CGCTGTCGCT GCTGATCGTC GCCGCGATCG GGCTGTTTCT GTATCGCATC GCCTTCCAGC CGCTGGCGCA CACTTCGGTG CTGGTGCTGC TGATCGCCTC GGTCGGCTGC CACTTGGCGC TGCAAGGCTT CGGCCTGGTC TTTTTCGGCG CCGAAGGCCT GCGCGGCCCA CCGCTGTCGG ACGTGGCGCT CAGCGTCGGA CCGTTGCTAT TCACCGGCCA GAGCCTCGCG GTGTACGGCA TCACGCTGGC GCTGATGGCG GCGCTGTGGC TGTTCTTCGG CTACACCCGC TACGGCAAGG CGCTGCGCGC CACCGCGGTC AACCGGCTCG GCGCGCGGCT GGTCGGCATC CGCACCTCGC TCTCCGGTCA GATCGCGTTC CTGCTCGCCT CGGTAATCGG TGCGATCTCC GGCATCCTGA TCGTACCGAT CACCACGCTC TATTACGACA CCGGCTTCCT GATCGGCCTC AAGGGCTTCG TCGCCGCGAT CATCGGCGGA CTGGTCAGCT ATCCGCTCAC CGCCATCGCC GCGATCGTGG TCGGTATCGT CGAGTCGTTC TCCTCGTTCT ACGCCTCGAA CTACAAGGAG GTCATCGTCT TCACGCTGAT CCTGCCGGTG CTGGTGCTGC GCTCGCTCGC CGCCCCCGCG GTCGAAGAAG AGAAGGACTA A
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Protein sequence | MNTTILLFLV QDGITNGAIY ALLGLALVLV FAVTRVILIP QGEFITFGAL TYATLSAGGV PGTAQLALVM GLVAFAFELF SARKSLHVAK VMRAALIYIA FPAIVLALAT WLPAHKPGVA VNIALSLLIV AAIGLFLYRI AFQPLAHTSV LVLLIASVGC HLALQGFGLV FFGAEGLRGP PLSDVALSVG PLLFTGQSLA VYGITLALMA ALWLFFGYTR YGKALRATAV NRLGARLVGI RTSLSGQIAF LLASVIGAIS GILIVPITTL YYDTGFLIGL KGFVAAIIGG LVSYPLTAIA AIVVGIVESF SSFYASNYKE VIVFTLILPV LVLRSLAAPA VEEEKD
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