Gene Rpal_1995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1995 
Symbol 
ID6409655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2157281 
End bp2158321 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content66% 
IMG OID642711881 
Productinner-membrane translocator 
Protein accessionYP_001990993 
Protein GI192290388 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACACCA CGATTCTGCT GTTCCTTGTT CAGGACGGTA TCACCAACGG CGCGATCTAC 
GCACTGCTGG GGCTGGCGCT GGTGCTGGTC TTTGCGGTCA CCCGGGTGAT CCTGATCCCC
CAGGGTGAAT TCATCACATT CGGCGCTCTC ACCTACGCAA CGCTGTCGGC CGGCGGCGTG
CCGGGCACCG CGCAGCTTGC GCTGGTAATG GGCCTGGTGG CGTTCGCCTT CGAGCTGTTC
AGCGCCCGCA AATCGCTGCA TGTCGCCAAA GTGATGCGCG CGGCGCTGAT CTACATCGCC
TTCCCGGCGA TCGTGCTGGC GCTGGCGACC TGGCTGCCGG CGCATAAGCC GGGCGTCGCC
GTCAACATCG CGCTGTCGCT GCTGATCGTC GCCGCGATCG GGCTGTTTCT GTATCGCATC
GCCTTCCAGC CGCTGGCGCA CACTTCGGTG CTGGTGCTGC TGATCGCCTC GGTCGGCTGC
CACTTGGCGC TGCAAGGCTT CGGCCTGGTC TTTTTCGGCG CCGAAGGCCT GCGCGGCCCA
CCGCTGTCGG ACGTGGCGCT CAGCGTCGGA CCGTTGCTAT TCACCGGCCA GAGCCTCGCG
GTGTACGGCA TCACGCTGGC GCTGATGGCG GCGCTGTGGC TGTTCTTCGG CTACACCCGC
TACGGCAAGG CGCTGCGCGC CACCGCGGTC AACCGGCTCG GCGCGCGGCT GGTCGGCATC
CGCACCTCGC TCTCCGGTCA GATCGCGTTC CTGCTCGCCT CGGTAATCGG TGCGATCTCC
GGCATCCTGA TCGTACCGAT CACCACGCTC TATTACGACA CCGGCTTCCT GATCGGCCTC
AAGGGCTTCG TCGCCGCGAT CATCGGCGGA CTGGTCAGCT ATCCGCTCAC CGCCATCGCC
GCGATCGTGG TCGGTATCGT CGAGTCGTTC TCCTCGTTCT ACGCCTCGAA CTACAAGGAG
GTCATCGTCT TCACGCTGAT CCTGCCGGTG CTGGTGCTGC GCTCGCTCGC CGCCCCCGCG
GTCGAAGAAG AGAAGGACTA A
 
Protein sequence
MNTTILLFLV QDGITNGAIY ALLGLALVLV FAVTRVILIP QGEFITFGAL TYATLSAGGV 
PGTAQLALVM GLVAFAFELF SARKSLHVAK VMRAALIYIA FPAIVLALAT WLPAHKPGVA
VNIALSLLIV AAIGLFLYRI AFQPLAHTSV LVLLIASVGC HLALQGFGLV FFGAEGLRGP
PLSDVALSVG PLLFTGQSLA VYGITLALMA ALWLFFGYTR YGKALRATAV NRLGARLVGI
RTSLSGQIAF LLASVIGAIS GILIVPITTL YYDTGFLIGL KGFVAAIIGG LVSYPLTAIA
AIVVGIVESF SSFYASNYKE VIVFTLILPV LVLRSLAAPA VEEEKD