| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1991 |
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| Symbol | |
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| ID | 6409651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2152522 |
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| End bp | 2153679 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711877 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_001990989 |
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| Protein GI | 192290384 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.179885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCAAGT TCAAGCTATC CGCCACGGCG ATCGCCGTGG CCCTCGCGTT GCCGGGGCTT
TCCGGGGCCG CGCTTGCCGA AACTAACGAA ATCACCATCG GTATCACCGT CACCACCACC
GGTCCGGCGG CGGCACTCGG CATTCCGGAG CGCAATGCTC TAGAATTCGT GGCTAAGGAA
ATCGGCGGTC ATCCGCTCAA GTTGATCGTG CTCGACGACG GCGGCGATCC CACCGCGGCC
ACCACCAATG CGCGGCGTTT CGTCACGGAG TCGAAGGCCG ACGTGATCAT GGGCTCGTCG
GTGACGCCGC CAACCGTGGC GGTCTCCAAC GTCGCCAACG AAGCGCAGGT GCCGCACATC
GCGTTGGCGC CACTGCCGAT CACGCCGGAG CGCGCCAAGT GGTCGGTGGC GATGCCGCAG
CCGATCCCGA TCATGGGCAA GGTGCTCTAC GAGCACATGA AGAAAAACAA CATCAAGACC
GTCGGCTACA TCGGCTATTC GGATTCCTAC GGCGATCTGT GGTTCAACGA CCTGAAGAAG
CAGGGCGAGG CTATGGGTTT GAAGATCGTC GCCGAAGAGC GCTTCGCGCG GCCGGACACG
TCGGTGGCAG GTCAGGTGCT GAAGCTGGTC GCCGCCAATC CGGATGCGAT CCTGGTCGGT
GCGTCCGGCA CCGCGGCAGC GCTGCCGCAG ACCAGTCTGC GCGAGCGCGG TTACAAGGGC
CTGATCTATC AGACCCATGG CGCCGCCTCG ATGGACTTCA TCCGTATCGC CGGCAAGTCG
GCCGAGGGCG TGCTGATGGC GTCGGGCCCG GTGATGGATC CGGAAGGTCA GGACGACAGC
GCGTTGACCA AGAAGCCTGG CCTCGAACTC AACACCGCCT ATGAAGCCAA GTACGGCCCG
AACAGCCGCA GCCAGTTCGC CGCGCATTCG TTCGACGCCT TCAAGGTGCT GGAGCGGGTG
GTGCCGGTGG CGCTGAAGAC CGCCAAGCCG GGCACGCAGG AATTCCGCGA GGCGATCCGC
AAGGCGCTGG TCAGCGAAAA GGACATCGCG GCGAGCCAGG GCGTCTACAG CTTCACTGAA
ACCGATCGCT ACGGCCTCGA CGACCGTTCG CGCATCCTGC TGACGGTGAA GGATGGCAAA
TACGTGATGG TGAAGTAA
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| Protein sequence | MPKFKLSATA IAVALALPGL SGAALAETNE ITIGITVTTT GPAAALGIPE RNALEFVAKE
IGGHPLKLIV LDDGGDPTAA TTNARRFVTE SKADVIMGSS VTPPTVAVSN VANEAQVPHI
ALAPLPITPE RAKWSVAMPQ PIPIMGKVLY EHMKKNNIKT VGYIGYSDSY GDLWFNDLKK
QGEAMGLKIV AEERFARPDT SVAGQVLKLV AANPDAILVG ASGTAAALPQ TSLRERGYKG
LIYQTHGAAS MDFIRIAGKS AEGVLMASGP VMDPEGQDDS ALTKKPGLEL NTAYEAKYGP
NSRSQFAAHS FDAFKVLERV VPVALKTAKP GTQEFREAIR KALVSEKDIA ASQGVYSFTE
TDRYGLDDRS RILLTVKDGK YVMVK
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