Gene Rpal_1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1966 
Symbol 
ID6409626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2122477 
End bp2123289 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content66% 
IMG OID642711852 
Productenoyl-CoA hydratase 
Protein accessionYP_001990964 
Protein GI192290359 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.231207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGATC GCGTTTCGGT GACGATCACC GACGGCGTCG CCGATGTCCG GCTGGTACGT 
GCGGACAAGA TGAATGCGCT CGATGCCGCG ATGTTCGAGG CGTTGGTGAA CACCACCGAG
CGGCTGGCGA ACGAAAAGGG CGTGCGCGCC GTGGTGCTGT CGGGCGAGGG CAAGGCGTTC
TGCGCCGGCC TCGACATGGG ACGTTTCGCC GCGATGAAGG AGAGTGGCGG CAACGGAATT
CCGGGAGGCG AATTTCGTGA CCTGACCAAG CGCACCCACG GCCAGGCCAA CGCGCCGCAG
CAGGCGGTGT GGGGCTGGCG GATGCTCCCG GTGCCGGTGC TTGCTGCAGT GCACGGTGTT
GCATTCGGCG GCGGCTGTCA GCTCGCGCTC GGCGCGGACA TCCGGTTGAT AGCGCCGGAC
GCCAAGATGT CGGTCATGGA AATCAAATGG GGACTGGTGC CGGACATGGC CGGCACGCCA
ATCCTGGCGA CGCTGCTGCG CGACGACGTG CTGCGCGAAC TGACCTACAC CGGACGGATC
GTCGCGGCAC AGGAGGCGGT GAGCATCGGC CTCGCCACCA AGATCGTCGA CGATCCGTAC
CAAGCCGCGC TGGAAATGGC CCGCGAGATC GCCGGCAAGA ATCCGGATGC GGTGCGCGCC
GCCAAGCGGA TGATGAACAA GCTCTCGGTC GATCCGGGGC CGGCGCTGCT CGCTGAGAGC
GTCGAGCAGC AGAAGTTGAT CGGCTCGCCG AACCAGACCG AAGCGGTGCG CGCGAATTTG
GAAAAGCGCG CGCCCAACTT CATCGACGCA TAG
 
Protein sequence
MNDRVSVTIT DGVADVRLVR ADKMNALDAA MFEALVNTTE RLANEKGVRA VVLSGEGKAF 
CAGLDMGRFA AMKESGGNGI PGGEFRDLTK RTHGQANAPQ QAVWGWRMLP VPVLAAVHGV
AFGGGCQLAL GADIRLIAPD AKMSVMEIKW GLVPDMAGTP ILATLLRDDV LRELTYTGRI
VAAQEAVSIG LATKIVDDPY QAALEMAREI AGKNPDAVRA AKRMMNKLSV DPGPALLAES
VEQQKLIGSP NQTEAVRANL EKRAPNFIDA