| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1925 |
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| Symbol | |
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| ID | 6409585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2073667 |
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| End bp | 2075706 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642711811 |
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| Product | bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase |
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| Protein accession | YP_001990923 |
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| Protein GI | 192290318 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases
[COG2030] Acyl dehydratase |
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| TIGRFAM ID | [TIGR02278] phenylacetic acid degradation protein paaN |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0838003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCA TCCTGCAAAG CCTGGCCTGC GATCGCTGGG AGACGCCGGC GACCGGGCTG
GTCGATATTC CGAGTGCGAT CGACGGCCGG GTCGTGGCGC GCGCGTCCAG CGCGGGACTC
GATTTCGCGG CCATCGTCCG CCACGCACGG CAGGTCGGCG GGCCGAAGCT GCGGGCGATG
ACGTTTCATC AGCGCGCCGA TATGTTGAAG GCGCTCGGCG CTTACTTGAG CGAACGTAAA
GAGAAGCTCT ACGCGCTCGC GGCCGACACC GGCGCCAACC GCCGCGACAA CGCCATCGAT
ATCGACGGCG GTCTGGTCAC GCTCGCGGCC TTTGCGTCGC GCGGCCGCCG CGAACTGCCG
GATGCGGGTT TCATCACCGA GGGCGAGGTC GAGGCTTTGT CGAAGCGAGG CAGCTTCGTC
GGCCAGCACA TCCTCACCCC GCTGCACGGC GTCGCGGCGC ATATCAACGC CTTCAACTTC
CCGTGCTGGG GCTTGCTCGA AAAGCTCGCA CCGGCGCTGC TGGCCGGCGT GCCGGTGATC
GCCAAGCCGG CGACTGCGAC GGCCTATGTG GCCGAGGCGC TGGTCAAGCT GATCGACGAG
TCGAAGCTGC TGCCGCAAGG CGCGCTGCAG CTCGTCTGCG GCGGGCTTGG CGATTTGCTG
GACCACCTGA ACGGCCAGGA CGTGATCGCT TTCACCGGAT CGCTGGAGAC CAGCGAAAAG
CTGCGCGCAC ATCCGAACGT CGCGCGCCAC AGCATTCGCT TCATCGCCGA ACGCGACTCG
CTGAACGCCG CGATCCTCGG GCCGGACGTC ACACCGGACG CGCCGGAGTT CGATCTGTTT
GTCCGCGAGA TCGTGCGCGA GATGACCGCC AAGGCCGGGC AGAAATGCAC CGCGATCCGC
CGCGTGCTGG TGCCGCGCAC GCAGCAGGCT GCAGTGATCG AGGCGCTGAA GGCCAGGCTC
GCCGAGGTCA GGCTTGGCGA CCCGCGCCGC GACGACAAGT CGATGGGGCC GCTGGTCAGC
CGCAGCCAGC GCGAGGCGGT GCGAGCCGCG ATCGCGACGC TGCAGAGCGA AGCCGAAATC
GTGTTCGGCG ATCCGAACGT CTGCGAAGGT GAGGGCATTG ATGCCCAGGC GGGTGCTTAT
CTGGCGCCGG TGCTGCTGCG CGCGCGCGAT CCGATGCAGG CCAGGCTGGT TCACGCCACC
GAAGCGTTCG GCCCGGTCGC AACCGTGCTG GCCTATGACG AGGTCGATCA GGCGATCGAG
CTGGTGCGTC GCGGCGAGGG CAGTCTGGTG GCGTCGCTAT TCACCTATGA CGACGTCGTT
GCCGAGCAGA TGATCCTCGG CCTCGCGCCG TTCCATGGGC GGCTCTTGAT CGTCGATCGC
GACGATGCGG CGGAATCCAC CGGCCACGGC ACGCCGCTGC CGGCGCTGCT GCATGGCGGG
CCGGGCCGCG CCGGTGGGGG AGAGGAGCTC GGCGGCTTGC GCAGCGTGTA TCACTACATG
CAGCGCACCG CGATCCAATG CTCACCGCGC CGCCTCGCGC GCCTCACCGG CACCTGGACG
CGCGGCGCGC CGGCGCCGGC GGTCGAGGTG CATCCGTTCA AGCTCAACTA CAACCAGCTC
GCCATCGGCC AGAGCATTGA GACTGCGAGC CGGCCGATCA CGCTTCAAGA CATCGAGCAC
TTCGCGCATT TCACCGGCGA CACCTTCTAC GCCCACATGG ACGAGGCGGC CGCCAAGGCC
AATCCGTTCT TTCCCGGCCG CGTCGCGCAC GGCTATCTGA TCCTGGCGTT CGCCGCCGGG
CTGTTCGTCG ATCCCGCGCC GGGCCCGCTG CTCGCCAATT ACGGCCTGGA CAATCTGCGC
TTCCTGAAAC CCGTTTCGCC CGACGACAGC ATCAAGGTGA AGCTCACCGT GAAGCAGAAG
TCGCCGGCGC GGCGGCCGGA ATATGGCGAG GTGCGCTGGG ACGTCGAGGT CGTCAACCAG
AACGGCGAGC CGGTGGCGCG CTATGATCTC TTGACGATGA GCTCCCGTCC CGCGGCATAG
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| Protein sequence | MTAILQSLAC DRWETPATGL VDIPSAIDGR VVARASSAGL DFAAIVRHAR QVGGPKLRAM
TFHQRADMLK ALGAYLSERK EKLYALAADT GANRRDNAID IDGGLVTLAA FASRGRRELP
DAGFITEGEV EALSKRGSFV GQHILTPLHG VAAHINAFNF PCWGLLEKLA PALLAGVPVI
AKPATATAYV AEALVKLIDE SKLLPQGALQ LVCGGLGDLL DHLNGQDVIA FTGSLETSEK
LRAHPNVARH SIRFIAERDS LNAAILGPDV TPDAPEFDLF VREIVREMTA KAGQKCTAIR
RVLVPRTQQA AVIEALKARL AEVRLGDPRR DDKSMGPLVS RSQREAVRAA IATLQSEAEI
VFGDPNVCEG EGIDAQAGAY LAPVLLRARD PMQARLVHAT EAFGPVATVL AYDEVDQAIE
LVRRGEGSLV ASLFTYDDVV AEQMILGLAP FHGRLLIVDR DDAAESTGHG TPLPALLHGG
PGRAGGGEEL GGLRSVYHYM QRTAIQCSPR RLARLTGTWT RGAPAPAVEV HPFKLNYNQL
AIGQSIETAS RPITLQDIEH FAHFTGDTFY AHMDEAAAKA NPFFPGRVAH GYLILAFAAG
LFVDPAPGPL LANYGLDNLR FLKPVSPDDS IKVKLTVKQK SPARRPEYGE VRWDVEVVNQ
NGEPVARYDL LTMSSRPAA
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