Gene Rpal_1912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1912 
Symbol 
ID6409572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2061890 
End bp2062672 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content69% 
IMG OID642711798 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_001990910 
Protein GI192290305 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCGACA GCGACACTGC CAGCGCGCCG GTGCTGACCA TCGACGGTCC TCGCGCCACC 
ATCCGACTGA ACCGCCCCAA GCACCTCAAC CGGCTGCAGC CGGACGACCT CGCCACCCTG
CTCGATCAAT TCGCGCGGCT CGATGCCGAT CCGGCGGTGC GGGTGCTGGT GCTCACCGGC
ACCGGCCGGG CGTTCTCGGC GGGCTTCGAT CTCGGCGAGG TCGCCGAACG CGCCACCGCG
GAGGTCGAGG CCGAATCCCC CGGGTCGGCG TTCGAAGTCG TGGTCAACCG GCTCGAGGAT
CTGCGGGTGC CGACGATCTG CCGACTCAAC GGCGGCGTCT ATGGCGGCTC GACTGATCTG
GCCCTGGCCT GTGATTTCCG CATCGGCGTC GACACCGCCG AGATGTTCAT GCCTGCCGCA
AGGCTCGGGC TGCATTACTA TCCGGGCGGC ATCAAGCGCT ACGTCTCCCG CCTCGGCATC
GACAACGCCA AGCGGCTGTT CCTCACCGCG CAGCGGATCG AAGCGGCCGA GATGCTGCGG
ATCGGCTATC TCACCGCGAT GGTGCCGATG GACCGGCTCG ACCGCGAGGT CGACGCCTTG
GCGACGACGC TGGCCGGCAA CGCGCCGAAC GCGGTCGCCG GCATGAAGCG CGCCATCAAC
GAATTCGCCC GCGCCGCGTT CGACGAACAA GCCGCCGACA CCCGCGCCCG CGCCTCGATG
CGCAGCGACG AGATCAAGGA AGGCATCGCG GCGTTCACGG AAAAGCGTGC GCCGCGGTTT
TGA
 
Protein sequence
MCDSDTASAP VLTIDGPRAT IRLNRPKHLN RLQPDDLATL LDQFARLDAD PAVRVLVLTG 
TGRAFSAGFD LGEVAERATA EVEAESPGSA FEVVVNRLED LRVPTICRLN GGVYGGSTDL
ALACDFRIGV DTAEMFMPAA RLGLHYYPGG IKRYVSRLGI DNAKRLFLTA QRIEAAEMLR
IGYLTAMVPM DRLDREVDAL ATTLAGNAPN AVAGMKRAIN EFARAAFDEQ AADTRARASM
RSDEIKEGIA AFTEKRAPRF