| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1907 |
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| Symbol | |
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| ID | 6409567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2054902 |
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| End bp | 2056776 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711793 |
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| Product | acyl-CoA synthetase |
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| Protein accession | YP_001990905 |
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| Protein GI | 192290300 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0743337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCCA GCGCAGCCGC AGTGCTGACC AAGCCGCCCT TTCGCAAGGT GAACTGGCTA
CCGCGCGAGA TCGACGTCGA TCGCCGCGAG GGCGGCGTCA TCGTGATGAA GTCGCGCTTC
CCGCTGATGG ATCACGATCC CAACCTGCCG ATGGCGCTGG CGAAGTGGGC CAAGCAGCGG
CCGGATCATA TCTGGCTGGC GCAGCGCAAG GGGCCGGAGC GGCAGTGGCA CAAGGTCAGC
TACGCCGAGG CCAAGCGCAT CGTCGACGGT CTCACCCAGG CGCTGCTTGA CCTGAAGCTG
CCGGAAGGCC GGCCGCTGAC GGTGCTGTCC GGCAATTCGA TCGAGCATGC GCTGATCATG
ATGGCGGCGA TGCAGGCGCG GATTCCGACC GCGCCGGTGT CGCCGGCCTA TTCGCTGATG
AGCCACGATC ATCTCAAGCT GAAGTATCTG TTCGATCTGG TGAAGCCGGC TGCCGTGATG
GTGCAGGAAG GGACTCCCTT CACCAAGGCG CTGCACGCGC TCGATCTGAA GGACGTCCAG
GTGATCCACG TCGCCAATCC GGCCGACGGC ATCGCCAGCA TCGCGTTCGA CGACATGGTG
GCGACGCCGG TGACCGACCA GGTGGCGCAG TCGATCGCGC AGATCACGCC CGACACCGTC
GCCAAATTCC TGTTCACCTC CGGCTCGACC GGGATGCCGA AGGCGGTGAT CAACACCCAG
CGGATGATGT GCGCCAACGC TGCGATGATG ATGCAGGTGC GGCCACGCGA TCCGGACGGT
CCGCCGCCGG TGCAGCTCGA TTGGATGCCG TGGAATCACA CCATGGGCGG CAATGCGGCG
TTCAACCCGT TGTTGATCGA AGGCGGCACG CTGTACATCG ACGACGGCCG CCCGGTGCCC
GGCCAGATCG AAGAGACGCT GCGCAACCTG CGCGAAATCT CGCCGACCTA CTACGCCAAC
GTGCCGGCCG GCTACGCCGC GCTTGCGAGC GCGATGGAGA AGGACGACGC GCTGTGCCGG
TCGTTCTTCA AAGACATGCA GCTGATGGCC TATGGCGGCG CCCGGCTGCC CGACGATCTG
TACGAACGGA TGCAGGCGCT GGCGGTGCGC GCCACCGGAC ACCGGCTGGT GTTCTACACT
GGCTGGGGCT CGACCGAGAC CTCGCCGACC TCGACCGGCA CCTATTGGGA CACTGAACGC
GTCGGCCTGA TCGGGCTGCC GTTCCCCGGC GTCGAATTGA AGATGCTGCC GGTCGGCGAC
AAGTACGAAC TGCGGCTTCG CGGCGTCAAC GTGATGCCGG GCTATCATGG CCAGCCGGAT
CTCACTGAGA AGGCGTTCGA CGAAGAGGGA TTCTACAAGA TCGGGGACGC CGGCGTGTTC
GTCGATCCGA ACGATCCGGT GAAGGGCATC ATCTTCGCCG GCCGGGTCGC CGAAGACTTC
AAGCTGATGA CCGGCACCTT CGTCCATGTC AGCACCGTGC GCACCGATGC GATCGCCGCG
GCGAGCCCGG TGATCCAGGA TGCACTCGTG GCGGGGCAGG ACCGCGCCTA TATCGGCCTC
TTGGCTTGGC CCAACCTCAA CGCCTGCCGG GTGATGATCG GCGATCCGAA TGCGAGCTTC
GAGGATGTGG TGAAGCATCC CGACGTGATC GCGGCGCTCC GTGCCGGGCT GCAGAAGCAC
AACCGCGAGG TCGAAGGCGC CAGCTCGATG CGGATCGCAC GCGCGATGCT GATGGTCGAG
CCGCCGTCGA TCGACGGCAA CGAACTCACC GACAAGGGCT ACATCAACCA GCGCGCCGGC
CTCGAACGCC GCGCCGCTTT GGTCGAGCGG CTGTACGCCG AACATCCGGA TTCGGACGTG
ATGGTGCTGC AGTGA
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| Protein sequence | MTASAAAVLT KPPFRKVNWL PREIDVDRRE GGVIVMKSRF PLMDHDPNLP MALAKWAKQR
PDHIWLAQRK GPERQWHKVS YAEAKRIVDG LTQALLDLKL PEGRPLTVLS GNSIEHALIM
MAAMQARIPT APVSPAYSLM SHDHLKLKYL FDLVKPAAVM VQEGTPFTKA LHALDLKDVQ
VIHVANPADG IASIAFDDMV ATPVTDQVAQ SIAQITPDTV AKFLFTSGST GMPKAVINTQ
RMMCANAAMM MQVRPRDPDG PPPVQLDWMP WNHTMGGNAA FNPLLIEGGT LYIDDGRPVP
GQIEETLRNL REISPTYYAN VPAGYAALAS AMEKDDALCR SFFKDMQLMA YGGARLPDDL
YERMQALAVR ATGHRLVFYT GWGSTETSPT STGTYWDTER VGLIGLPFPG VELKMLPVGD
KYELRLRGVN VMPGYHGQPD LTEKAFDEEG FYKIGDAGVF VDPNDPVKGI IFAGRVAEDF
KLMTGTFVHV STVRTDAIAA ASPVIQDALV AGQDRAYIGL LAWPNLNACR VMIGDPNASF
EDVVKHPDVI AALRAGLQKH NREVEGASSM RIARAMLMVE PPSIDGNELT DKGYINQRAG
LERRAALVER LYAEHPDSDV MVLQ
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