Gene Rpal_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1906 
Symbol 
ID6409566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2054045 
End bp2054851 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content66% 
IMG OID642711792 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_001990904 
Protein GI192290299 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.177848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGAGG CCTTGCTGGT CGATCATCGT GACGGTGTCG ATTGGGTCAC GCTCAATCGT 
CCGGATAGCC TCAATGCTCT CGATCCCAGC CTGATCGACG CGCTCAACGA TTATTTCGGC
CGCCTGCAGC GCGATCGGAC GACACGCGTC GTCGTGCTGA AGGGCGCGGG CGCCAATTTC
TGCGCCGGCC TCGACCTCAA ACACGCGATG GCGCGCCGCG CCGGTGAGAA CGCCACGCCC
GGCGTCACCG AGTCGCTGGA TTCGCAGCGC CGGATCGCCG ACATCGTGAT GCTGATGCGC
CGCTGCGCGC AGCCGATCAT CGCGCTGATC CGCGGCGCTG CGGCTGGCGG CGGCTTTGCG
CTCGCTCTGG CTTCCGATGT TCGCATCGCC GGGCGCAGCG CGCGAATGAA CTGCGCTTTC
ATCAAGCTCG GCCTCGGCGG CTGCGACATC GGCACCAGCT ACTTTTTGCC GCGCCTCGTC
GGTGTCTCGG TGGCGTCCGA ACTGATCCTC ACCGGCCGCT TCATCGGTGC CGAACGGGCG
CTGATGACCG GGCTGGTGTC GGAGCTGGTC GAGGACGATC AGCTCGAGGC CGCGGCGCAG
CCTTTCGTGG ATGCGATGAT GGCGGCTTCG CCAGTCGGTT TGCGGCTGTC CAAGGAGTGC
CTCAACATGG CGGTGGATGC CGGCTCGATC GAGCAGGTGA TCGCGATGGA GGATCGCAAC
CAGGTGCTGT GTTCGCGCTC GGAGGATTTC AAGGAAGGCG TCGCCGCGTT CCTCGAGAAG
CGCAAGCCGG TCTACGGCAA CCGCTGA
 
Protein sequence
MTEALLVDHR DGVDWVTLNR PDSLNALDPS LIDALNDYFG RLQRDRTTRV VVLKGAGANF 
CAGLDLKHAM ARRAGENATP GVTESLDSQR RIADIVMLMR RCAQPIIALI RGAAAGGGFA
LALASDVRIA GRSARMNCAF IKLGLGGCDI GTSYFLPRLV GVSVASELIL TGRFIGAERA
LMTGLVSELV EDDQLEAAAQ PFVDAMMAAS PVGLRLSKEC LNMAVDAGSI EQVIAMEDRN
QVLCSRSEDF KEGVAAFLEK RKPVYGNR