Gene Rpal_1890 details

Gene Information

• Locus tag: Rpal_1890
• ID: 6409550
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 2038605
• End bp: 2039201
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 642711779
• Product: Superoxide dismutase
• Protein accession: YP_001990891
• Protein GI: 192290286
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0605] Superoxide dismutase

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCTTCA CGCTACCCGA ATTGCCGTAT GCCTACGACG CGTTGCAGCC GTACATGTCG 
AAGGAGACCC TGGAATATCA CCACGACAAG CACCATCAGG CGTATGTCAC CAACGGCAAC 
AACCTGCTGA AGGGCACCGA ATTCGAGGGC AAGTCGCTCG AGGAGGTGGT CAAGGGCTCG 
TTCAACAAGA ACGCCCCGTT GTTCAATAAC GCCGCCCAGC ACTTCAACCA CATCCACTTC 
TGGAAGTGGA TGAAGCCGAA CGGCGGCGGC AGCAAGCTGC CGGGCGTGCT CGAAAAGAAG 
ATCAACGAAG ACCTCGGCGG CTTCGAGAAG TTCAAGACCG ATTTCGCCGC GGCCGGCGCC 
GGCCAGTTCG GCTCGGGCTG GGCCTGGCTC TCGGTCAAGA ACGGCAAGCT CGAAATCTCC 
AAGACTCCGA ACGGCGAGAA CCCGCTGGTG CACGGCGCCA CCCCGATCCT CGGCGTCGAC 
GTCTGGGAGC ACTCCTACTA CATTGATTAT CGCAACCGCC GTCCGGACTA CCTGAAGGCG 
TTCGTCGATA GCCTGATCAA CTGGGAGTAT GTCGAGGAGC TGTACTCCAA GGCCTGA 

 

Protein sequence

MTFTLPELPY AYDALQPYMS KETLEYHHDK HHQAYVTNGN NLLKGTEFEG KSLEEVVKGS 
FNKNAPLFNN AAQHFNHIHF WKWMKPNGGG SKLPGVLEKK INEDLGGFEK FKTDFAAAGA 
GQFGSGWAWL SVKNGKLEIS KTPNGENPLV HGATPILGVD VWEHSYYIDY RNRRPDYLKA 
FVDSLINWEY VEELYSKA