| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1843 |
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| Symbol | |
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| ID | 6409502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1980183 |
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| End bp | 1981004 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642711731 |
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| Product | protein of unknown function DUF1078 domain protein |
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| Protein accession | YP_001990844 |
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| Protein GI | 192290239 |
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| COG category | [N] Cell motility |
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| COG ID | [COG4786] Flagellar basal body rod protein |
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| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATCAC TTGGTGCATT GTGGACGGCG ACCACGGGCC TGCAGGCTCA GTCCGCCGCT
TTTGAGAACA TCTCGGGCAA TGTCGCCAAT GCGCAGACAA CTGCATTCAA GGCGACCAAT
ACGGCTTTTT CCGACCTCAT CTATCCGCCG CAGGTCTCGG ATACCGTCTT ATGGCGTTCG
GTCCTGACCA ACGGTCAGCA GGGATCGATC AGCTATGATC CGGTGAGTAC CCATATGGCG
ATCGGCGGGG AGGGGTATTT CACGGTCGAG GCGCCGTCGG GGGTGAGCGC GAGCGGCCAG
CCGACGTTCA GTACGAGCGA GACCACCTAT ACGCGACGTG GTGACTTCGA TCTTAAGAAC
GGCTATCTCG TCAACGGCGC CGGTTATTAC CTGATGGGGT CCCAAATTGA TCCTGTCACG
GGCGCTGTGG GAAGCACGGG GCCGCTTCAG TTTGATACCA GTACGGCGCT GCCGGACCTC
GGAGTTCTGC AGAGCCTCTC GGTCAGTTCA TCCGGCAAGC TGCAAGGCAC CTATTCCAAG
GGCCAGACGG TCGACGTTGC GTCGCTTTCC ATTGCCAGCT TTGCCGGCCA GGGGTTCATG
AAACAGGGCA GCGGCGGAAC ATTCTCGCCG ACGCCTCAAT CCGGTCCGGC CCTCTACGTC
AACGCCGGCA CGGTGGTCGG GAGCGCCCTG GAGGCGTCGA ATGTGGACAT CGCGGATCAG
ATGACCACGA TGGTTCAAGC GCAGCAGGCC TATTCGGCAT GCACACGAGT CGTGACCGCA
TCGAACGAGA TGATGCTGAC GATGACCAGT CTCACCATCT GA
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| Protein sequence | MGSLGALWTA TTGLQAQSAA FENISGNVAN AQTTAFKATN TAFSDLIYPP QVSDTVLWRS
VLTNGQQGSI SYDPVSTHMA IGGEGYFTVE APSGVSASGQ PTFSTSETTY TRRGDFDLKN
GYLVNGAGYY LMGSQIDPVT GAVGSTGPLQ FDTSTALPDL GVLQSLSVSS SGKLQGTYSK
GQTVDVASLS IASFAGQGFM KQGSGGTFSP TPQSGPALYV NAGTVVGSAL EASNVDIADQ
MTTMVQAQQA YSACTRVVTA SNEMMLTMTS LTI
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