| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1835 |
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| Symbol | |
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| ID | 6409494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1972538 |
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| End bp | 1973248 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711723 |
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| Product | transglutaminase domain protein |
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| Protein accession | YP_001990836 |
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| Protein GI | 192290231 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.128283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGA CCGCCGCCTC CGAGATCGCG GTATGTCTGG CGCCGGCGGA ATTCATCGAC
AGCGATCATC CCGAAGTGAT CGCGCGCGCC GCGGAAGCCA CGCGTAACGC CGAAACGCTC
GCCGACAAAC TCCGCGCGCT GTACCTCGCG GTGCGCGACG GCGTCCGCTA CGATCCTTAT
GTCGACTTTT CCAGCCCCGA TATCTTCCGC GCGTCGAGCG AACTGCGCGC CGAGCGCGGC
TACTGCGTCG GCAAAGCTTC GGCGTTCGCG GCGCTGGCGC GCGCGTCCGG CATTCCGGCA
CGCGTATGCT TTGCCGACGT CCGTAATCAT CTCGCCACCG AGAACCTGAC CCGAACGATG
GGAACCGATC TGTTCGCCTG GCACGGCTAC GCCGAGTGCT TCACTGGTGA GCGATGGGTC
AAGGCGTCGC CCACCTTCAA TCGCACGCTG TGCGACAAGC TCGGGGTTGC GCCGCTCGAC
CTCGATGGCT CCTCGGACGC GGTGATGCAG GCGTTCGACA ACAACGACGC GCGGTTCATG
GAATATGTCC GCGAGCATGG CGCGTATTTC GATGTGCCGG TGAAATTCGT GCAGGCCGAG
ATGAAGCGCC AGTACCCCCA CCTTGCGCAA CAGGGCAGCC TGCGCGGCTC GATGGAAGAG
GAAGCGGCGC AGGATGCGGC GGCGCGCGCT GCAGGTTCGG CTCAGCGCTG A
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| Protein sequence | MAKTAASEIA VCLAPAEFID SDHPEVIARA AEATRNAETL ADKLRALYLA VRDGVRYDPY
VDFSSPDIFR ASSELRAERG YCVGKASAFA ALARASGIPA RVCFADVRNH LATENLTRTM
GTDLFAWHGY AECFTGERWV KASPTFNRTL CDKLGVAPLD LDGSSDAVMQ AFDNNDARFM
EYVREHGAYF DVPVKFVQAE MKRQYPHLAQ QGSLRGSMEE EAAQDAAARA AGSAQR
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