| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1831 |
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| Symbol | |
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| ID | 6409490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1968531 |
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| End bp | 1969589 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711719 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001990832 |
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| Protein GI | 192290227 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.366061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATCCGC CACCGCCGTC ATCAACCCTC CTGCAGCCGG TTCGGTTCTC GACGGAGCAG
CTTCCTGCAC GCGACCGGTT CGATGCCTGG CGGGAGTATC TGCGTCCCGT TGCCGATCTG
GCGCCGGCAG CGGACGGGGT GGGGACCTCT GCGATCGATC TTGCGTGCTG GGATCTCGGC
AGCTTTGCGA TGTGCCAGGA GCGGAACTCG GGAACGCGGT TCTCGCGCAC GTTGCGGCGC
GTGAAGACGG TATTTGCGGA TCACTGGTAC CTGTTCCTGA TCAAGGCCGG ATCGAATTGG
GTCGTCAGCG ACGGCGGCTG GTCGTCCGGG CAGGAGATCC GCGGCGCGCC GGGGCAGCTC
AGCTTGTATT CGCTCGGCGA AGCATTCCAT GGCGAGATGA ACCCGATCGA GGTCTTGATG
CTGTTCATCC CGCGCGACGC ATTCGCCCGG CAGGCCGGTA GGCTCGACCG GCTCAACAAC
ACCATCATCG ACGCCACGCG TGGGCGGCTC CTGTCCGACT ACATGCTGGC GCTCGAGCGC
CAGTTGCCGA ATCTGACGCA TGACGAGGTG CCGGCGATCG TCCGCGCCAC CGAGGCGATG
ATCGCGGCGT GCCTGACGCC GACGCCGCAC AGCCTGGAAG ATGCGCGGGA CGGTGTCATT
CTCAGTCTCG GAGAACGCGC CCGCAAGGTG GTGCAGGCTC GGCTGTACGA TCCAAGATTG
ACGCCGGCCT GTCTCGCCAA GAGCATCGGC GTGTCACGGA GCGCGCTGTA TCGGCTGTTC
GAACCGCACG GCGGCGCGGC GCGCTACGTG CGCAACACGC GCCTCGCCGC CGCGCATCGC
GCGCTGTGCG ATCTCACCGA GACCCGGCAG ATCCAACAGA TCGCCGGTTC GTTCGGGTTC
ACCAGCTCGC AGGAATTCAG CCGCGCCTTT CGTCTGCGAT ACGGCTACAG CCCGTCGGAA
CTGCGCGCTG ATATCAGCAG ATCGACGCTC CACCTCGGCC GCGATCCGGT GATCGAGGGC
GGCCGGACGC TCGGCGAGTT TTTACGAACC ACCGCTTGA
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| Protein sequence | MNPPPPSSTL LQPVRFSTEQ LPARDRFDAW REYLRPVADL APAADGVGTS AIDLACWDLG
SFAMCQERNS GTRFSRTLRR VKTVFADHWY LFLIKAGSNW VVSDGGWSSG QEIRGAPGQL
SLYSLGEAFH GEMNPIEVLM LFIPRDAFAR QAGRLDRLNN TIIDATRGRL LSDYMLALER
QLPNLTHDEV PAIVRATEAM IAACLTPTPH SLEDARDGVI LSLGERARKV VQARLYDPRL
TPACLAKSIG VSRSALYRLF EPHGGAARYV RNTRLAAAHR ALCDLTETRQ IQQIAGSFGF
TSSQEFSRAF RLRYGYSPSE LRADISRSTL HLGRDPVIEG GRTLGEFLRT TA
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