| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1808 |
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| Symbol | |
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| ID | 6409465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1942478 |
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| End bp | 1944022 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642711695 |
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| Product | hypothetical protein |
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| Protein accession | YP_001990810 |
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| Protein GI | 192290205 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.62822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGGTG CCGAGAGTCT GGTGCGGACG CTGGTCAAGG GCGGCGTCGA TGTCTGCTTC
ACCAACCCTG GCACGTCGGA AATGCACTTC GTCGCCGCGC TCGACCGGGT CGAGGGGATG
CGCTGTGTGC TCGGCCTGTT CGAGGGCGTC GTCACCGGCG CCGCCGATGG TTACTATCGG
ATGAAGGGCA CGCCGGCCTC GACGCTGCTG CATCTCGGCC CCGGTCTCGC CAACGGCCTT
GCCAACCTGC ACAACGCTAA GAAGGCCGCC TCCGGTATCG TCAACATCGT CGGCCAGCAC
GCCACCTACC ACATCGACTA CAACGCGCCG TTGACGTCGG ATATCGAAGG CTTGGCGCGG
CCGATGTCGG CCTGGGTCCG CACCTCGCCG GACGCCAAGT CGGTGGCGCG CGACGGCGCC
GCCGCGATTG CCGCCGCCAA GAGCTCGCCG GCGCAGATCG CCACGCTGAT CCTGCCGGCC
GACACCGCCT GGAACGAGGC CGACGGCGTT GCCGACGTGC CGGAAGACAG CCAGCGCCCG
ACCTATTCGC CCCATGCGGT CGAAGCCGCC GCGCGCGTGC TGCGCTCCGG CGAGCCGACG
CTGCTGCTGC TGTCCGGCGC TGCGCTGACC GAGCATGGCC TCGCGCTGGC GCAGCGGATC
GCCGGCAAGA CCGGTTGCAA GGTGATGGGC CAGACCTACA ACGCCCGGAT GGCGCGCGGG
CAGGGGCGCT ACTGGATTGA GCGGATTCCT TACGTGGTCG ATGCCGCGCT GCCGATCCTC
AAGCAGTTCC GCCACATCGT GCTGGTCGAG GCGATGGATC CGGTGGCGTT CTTCGCCTAT
CCGGACAAGC CGAGCCTGCT GAAGCCGGAA GGCTGCGAGG CGCATCGCGT CACCGAGATC
GGCGAGAATT CGGTGGCCGC GCTGGAAGCG CTGGCCGGCG CGCTCGGCGC CAAGGCGAGC
GACGCGGCGC CGCAGAAGCT GGTCGAGATC GCCAAGCCGA CCGGCGCGCT GACGCTGGAC
AACATCGCCC AGGCGATCGC GATGGCGATC CCCGAGAACG GCATCGTGAT CGATGAATCG
ATCACCACCG GTCGCGGTTT CTTCCCGCCG ACGGCGGCCG CCGCGCCGCA CGACTGGCTG
CAGAATCTCG GCGGCTCGAT CGGCTTTTCG CCGCCGGTCG CGGTCGGCGC CGCGGTGGCC
TGCCCGGACC GCAAGGTGCT GTGCATGGTC GGCGACGGCA GCGCGATGTA CACCGTGCAG
GCGCTGTGGA CCCAGGCGCG CGAAAACCTC GACGTCACCA CCGTGGTGTT TGCCAACCGC
AAGTATCAGA TCCTGCGCGG CGAGTTCGAC GGCGTCGGCG CCGGCAAGCC CGGCCAGCGT
GCCGAGGACA TGCTGACGCT GGACCGGCCG GACCTCGATT GGGTGGCGCT CGCCAAGGGC
ATGGGCGTGC CGGCCAAGAA CGTGTCGACC GCCGACGAGT TCAACGCGGC GCTCGCCGCC
GGCCTCGCCA GCGGCGGCCC GAACCTGATC GCGGTGCAGA TGTAA
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| Protein sequence | MNGAESLVRT LVKGGVDVCF TNPGTSEMHF VAALDRVEGM RCVLGLFEGV VTGAADGYYR
MKGTPASTLL HLGPGLANGL ANLHNAKKAA SGIVNIVGQH ATYHIDYNAP LTSDIEGLAR
PMSAWVRTSP DAKSVARDGA AAIAAAKSSP AQIATLILPA DTAWNEADGV ADVPEDSQRP
TYSPHAVEAA ARVLRSGEPT LLLLSGAALT EHGLALAQRI AGKTGCKVMG QTYNARMARG
QGRYWIERIP YVVDAALPIL KQFRHIVLVE AMDPVAFFAY PDKPSLLKPE GCEAHRVTEI
GENSVAALEA LAGALGAKAS DAAPQKLVEI AKPTGALTLD NIAQAIAMAI PENGIVIDES
ITTGRGFFPP TAAAAPHDWL QNLGGSIGFS PPVAVGAAVA CPDRKVLCMV GDGSAMYTVQ
ALWTQARENL DVTTVVFANR KYQILRGEFD GVGAGKPGQR AEDMLTLDRP DLDWVALAKG
MGVPAKNVST ADEFNAALAA GLASGGPNLI AVQM
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