| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1782 |
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| Symbol | |
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| ID | 6409439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1915331 |
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| End bp | 1916695 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711670 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001990785 |
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| Protein GI | 192290180 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACC AGATCAAGTA TGTGCTGGAC GAGGAGAACA TCCCGAAGTC CTGGTACAAT
CTCAACGCCG ACTTCCCGAC GCCGATGCCG CCGGTCCTGC ATCCGGGCAC GCATCAGCCG
GTCGGCCCGA GCGATCTGGA GCCGCTGTTT CCGATGGAGC TGATCCTCCA GGAGGTCGCG
ACCGAGCGCT ACATCGAGAT TCCCGAGCCG GTCCGTGACG TGTTCCGGAT GTGGCGCCCG
GCGCCGCTGA TCCGTGCGCG CCGCCTCGAG CAGGCGCTCG GCACGCCGGC CAAGATCTAC
TTCAAGTACG AAGGCGTTTC GCCGGCAGGT TCGCACAAGC CGAACACCGC CGTGCCGCAG
GCCTGGTACA ACAAGCAGGC CGGCATCAAG AAGCTGTCGA CCGAGACCGG CGCCGGGCAG
TGGGGCTCGT CGCTGGCGTT CGCCGGCTCG CTGTTCGGGC TCGACGTCCT CGTCTTCCAG
GTCCGCGTGT CGTACGACCA GAAGCCGTAT CGCCGCGCGC TGATGGAGAC CTACGGCGCC
CGCTGCATCG CGTCGCCGTC GAACGAGACC GATTCCGGCC GCGCCATTCT GGAGAAAAAT
CCGAACAGCC CCGGCTCGCT CGGCATCGCG ATCTCCGAAG CGGTGGAAGT CGCCGCCAAG
AACCCGGACA TCAAGTACGC GCTGGGTTCG GTGCTCAACC ACGTGATGCT GCACCAGACC
ATCATCGGCG AAGAAGCGAT CAAGCAGTTC GAACTGGCGG GCGATGATCC GGACGTCGTG
ATCGGCTGCG CCGGCGGCGG TTCGAACTTC GCCGGTCTGG CCTTCCCGTT CCTCGGCCTG
CAGCTCCGCG GCGGCCGCAA GCGGCGCATC ATCGCGGTCG AACCGGCGGC GTGCCCGACC
CTGACCCGCG GCACCTATGC CTACGACTTC GGCGACACCG CGCATCTCAC CCCGCTGGTG
AAGATGCATA CGCTCGGCTC AACCTTCATG CCGCCGGGCT TCCACGCCGG CGGTCTGCGC
TACCACGGCA TGAGCGGGAT GGTGTCGCAC GCCTACGAAC TCGGCCTGAT CGAAGCCCGC
GCCTACAAGC AGGTCGGCTG CTTCGAAGCC GGCGTGCAGT TCGCCCGCAC CGAAGGCATC
GTGCCGGCGC CGGAGTCCAC CCACGCGGTC CGCTGCGCCA TCGACGAGGC GCTGCGCTGC
AAGGAGGAGG GCAAGTCGGA AACGATCCTG TTCAACCTCT CCGGCCACGG CCACTTCGAC
ATGCAGGCCT ACATCAACTA CTTCGAAGGC AAGCTGGTCG ATCAGGACTA CGACGAAGCC
GACCTCGCCA CTGCGCTGGC CGGCCTGCCG GCGGTGGCGG CGTAA
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| Protein sequence | MSDQIKYVLD EENIPKSWYN LNADFPTPMP PVLHPGTHQP VGPSDLEPLF PMELILQEVA
TERYIEIPEP VRDVFRMWRP APLIRARRLE QALGTPAKIY FKYEGVSPAG SHKPNTAVPQ
AWYNKQAGIK KLSTETGAGQ WGSSLAFAGS LFGLDVLVFQ VRVSYDQKPY RRALMETYGA
RCIASPSNET DSGRAILEKN PNSPGSLGIA ISEAVEVAAK NPDIKYALGS VLNHVMLHQT
IIGEEAIKQF ELAGDDPDVV IGCAGGGSNF AGLAFPFLGL QLRGGRKRRI IAVEPAACPT
LTRGTYAYDF GDTAHLTPLV KMHTLGSTFM PPGFHAGGLR YHGMSGMVSH AYELGLIEAR
AYKQVGCFEA GVQFARTEGI VPAPESTHAV RCAIDEALRC KEEGKSETIL FNLSGHGHFD
MQAYINYFEG KLVDQDYDEA DLATALAGLP AVAA
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