Gene Rpal_1755 details

Gene Information

• Locus tag: Rpal_1755
• ID: 6409412
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 1884391
• End bp: 1885095
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642711643
• Product: ABC transporter related
• Protein accession: YP_001990758
• Protein GI: 192290153
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCTGC TTGAAGTCGA CCGCATCAAC ACGCTGTACG GTGACTCCCA TGTGCTGTTC 
GACCTCTCGA TCCGGGTCGA GCAGGGCGAG GTGGTGGCCT TGCTGGGCCG CAACGGCGCC 
GGCAAGACGA CCACGCTGCG TTCGATCATG GGCGTGCTGT CGCCACGGAA CGGCTCCATC 
CGCCTGGATG GCAAGCCGAT CGGCGGCTTG CCGCCGTCGG CGATCGCCGC CATGGGCGTT 
CAGCTCGTCC CCGAAGAACG CGCCATCTTC GGCGGGCTCA CGGTCGAGGA GAACTTGCGC 
ATCGCCGCGC TCACTGCCCC GAATGCCTGG ACGTTCGATC GAATCTACGA GGTGTTTCCG 
CGGCTCAAGG AACGGCGTAA ATCGGCGGGG CGCTCGCTGT CCGGGGGCGA GCAGCAGATG 
CTGGCGATCG CCCGCGCGTT GATCCGCGAT GCGCGCATCA TCCTGCTCGA CGAACCGTTT 
GAAGGTCTCG CGCCGTTGAT CGTGCGCGAC CTGGTCGCGG TCGCCCGCGA TCTCGCCGCC 
GAAGGACGGA CCATGATCGT GGTCGAACAG AATGTCGCTG CCGCGCTCAG CTTCGCCAAC 
CGGGTCTACG GCCTCAACAA CGGTCACGTC GTCTTCGAGG GCACCCCGGC CGATCTCACC 
GCCAACCCGG GCATGGCCCG CGACTTTCTC GGCGTCGCGT CCTGA 

 

Protein sequence

MSLLEVDRIN TLYGDSHVLF DLSIRVEQGE VVALLGRNGA GKTTTLRSIM GVLSPRNGSI 
RLDGKPIGGL PPSAIAAMGV QLVPEERAIF GGLTVEENLR IAALTAPNAW TFDRIYEVFP 
RLKERRKSAG RSLSGGEQQM LAIARALIRD ARIILLDEPF EGLAPLIVRD LVAVARDLAA 
EGRTMIVVEQ NVAAALSFAN RVYGLNNGHV VFEGTPADLT ANPGMARDFL GVAS