| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1730 |
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| Symbol | |
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| ID | 6409387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1853493 |
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| End bp | 1854782 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711618 |
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| Product | light-independent protochlorophyllide reductase subunit N |
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| Protein accession | YP_001990733 |
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| Protein GI | 192290128 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01279] light-independent protochlorophyllide reductase, N subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTTC ATGTCACAGG TTGTTCGACC GCGACCGCGG ATCAGCTGGT GTCTCGCGAA
ATCCGCACCG AGAGCGGGCA GCGCGAAGTG TTCTGCGGGC TGACCGGCAT CGTCTGGCTG
CATCGCAAGA TTCAAGATGC GTTCTTCCTG GTGGTCGGTT CGCGCACCTG CGCGCATCTG
GTTCAGTCGG CCGCCGGCGT GATGATCTTC GCCGAGCCGC GGTTCGGCAC GGCGATCATG
GAAGAGAAGG ATCTCGCCGG TCTCACCGAC GCCAATGACG AGCTCGACCG TGTGGTGACG
CAGCTTCTGG CGCGTCGTCC GGACATCAAG CTGCTGTTTC TGGTCGGCTC GTGCCCGTCG
GAAGTGATCA AGCTCGATCT GTCGCGCGCC GCGTTCCGCC TGTCGCAGCG GTTCTCGCCC
GGCGTTCGTA TCCTCAACTA CTCGGGCAGC GGCATCGAGA CCACCTTCAC CCAGGGTGAA
GACGCGTGTT TGGCGTCGCT GGTTCCGGAA CTGCCGGCCC AGACCGATAC CAAGCCGTCG
CTGCTGGTGG TCGGTTCGCT CGCCGACGTG GTGGAAGATC AGTTCGCGCG GATGTTCGAG
GCGCTCGGCG TCGGCAACGT CGCGTTCTTC CCGCCGCGCA AATCGACCGC GCTGCCCAGC
GTCGGACCGA ACACAAAGAT TCTGATGGCG CAGCCGTTCC TGCCCGACAC CGTGCGGGCA
CTGGAAGAGC GCGGCGCCAA GCGTCTCGCG GCGCCGTTCC CGCTCGGCGT GGAAGGCACC
ACCGGCTGGC TGCGTGCGGC TGCCGATGCG TTCGGTGTCG ATCCGGCGAA GTTCGAGCAA
GTCACCGCGC CCAATCGCGC CCGCGCCGAG CGCGCGCTCT CTGCGTTCAA GAGCGAGCTC
GGCGGCCGGC GAATCTTCTT CTTCCCCGAC TCGCAGCTCG AGATCCCGCT GGCGCGCTTC
CTGTCGCGTG AACTCGACAT GCAGCTCGTC GAAGTCGCCA CGCCGTATCT GCACCGCGAA
CATCTCGCCG AAGAGCTGAA GTTGTTGCCG ATCGAAGTCG CGCTGACCGA AGGTCAGGAC
GTCGACGATC AGCTCGACCG CTGCCGCATC GCGCGTCCCG ATATCGTGGT GTGCGGCCTC
GGCCTCGCCA ATCCGCTCGA AGCGGAAGGC ATCACCACCA AATGGTCGAT CGAACTCGTG
TTCACCCCGA TCCAGGGTTA CGAGCAGGCG GCCGATCTCG CTGAATTGTT CGCGCGGCCG
CTTGTGCGGC GCGCCAAGTT GGTGGCCTGA
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| Protein sequence | MTVHVTGCST ATADQLVSRE IRTESGQREV FCGLTGIVWL HRKIQDAFFL VVGSRTCAHL
VQSAAGVMIF AEPRFGTAIM EEKDLAGLTD ANDELDRVVT QLLARRPDIK LLFLVGSCPS
EVIKLDLSRA AFRLSQRFSP GVRILNYSGS GIETTFTQGE DACLASLVPE LPAQTDTKPS
LLVVGSLADV VEDQFARMFE ALGVGNVAFF PPRKSTALPS VGPNTKILMA QPFLPDTVRA
LEERGAKRLA APFPLGVEGT TGWLRAAADA FGVDPAKFEQ VTAPNRARAE RALSAFKSEL
GGRRIFFFPD SQLEIPLARF LSRELDMQLV EVATPYLHRE HLAEELKLLP IEVALTEGQD
VDDQLDRCRI ARPDIVVCGL GLANPLEAEG ITTKWSIELV FTPIQGYEQA ADLAELFARP
LVRRAKLVA
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