| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1725 |
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| Symbol | |
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| ID | 6409382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1847353 |
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| End bp | 1848747 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711613 |
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| Product | transcriptional regulator, Fis family |
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| Protein accession | YP_001990728 |
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| Protein GI | 192290123 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR02040] transcriptional regulator PpsR |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.671099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGTCAA AGTCCGTTCA TGCCGACATC ACCCTTCTGC TCGATATGGA GGGTGTGATT
CGCGAAGCCA CCCTGTCTCC GACGATGGCG GCCGAGAGCG TGGACGGTTG GCTGGGGCGT
CGCTGGAGCG ACATCGCGGG CGCCGAAGGC GGCGACAAGG TTCGCCGCAT GGTCGAAGAC
GCCCGCCGCA GCGGCATCTC GGCTTTCCGC CAGATCAATC AGCCTTTCCC GAGCGGCGTC
GAAATCCCGA TCGAATTCAC CACGATGCTG CTGGGCGATC GCACCGGCAT GATCGCGGTC
GGCAAGAACA TGCAGGCGGT CACCGAGCTG CATTCCCGGC TGATCGCTGC GCAGCAGGCG
ATGGAGCGCG ACTATTGGCG GTTGCGTGAA TTGGAGACTC GCTACCGCCT GGTGTTCGAC
GCCGCCGCCG ATGCGGTGAT GATCGTCTCC GCCGGCGACA TGCGCATCGT CGAAGCCAAC
CGGGCGGCAG TGAATGCGAT CAGCCGCGTC GAGCGCGGCA ATGACGACCT TGCGGGGCGT
GATTTCCTCG CCGAAGTGGC GGCTGCCGAT CGTGATGTGG TGCGCGACAT GCTGGCCCAG
GTGCGGCAGC GCGGCACCGC ACTCAGCGTC CTCGTTCATC TCGGCCGTTA CGACCGCGCC
TGGATGCTGC GCGGTTCGCT GATGTCGTCC GAGCGTCGTC AGGTTTTCCT GCTGCACTTC
ACCCCGGTGA CCACGACTCC CGCGATCGAC GACGTCGACG ATGATGCCGT GCTGCGCGGG
CTGATCGATC GCATTCCTGA CGGTTTCGTC GCACTGGATT CTGAAGGCGT CGTTCGTCAC
GCCAACCAGG CGTTTCTCGA TCTGGTGCAG ATCGGCTCCA AGCCTGCGGC GGTCGGACGA
TCGCTGGGCG GCTGGATGGG CCGTCCAGGC GCCGATCTGT CGAGCCTGCT GACGCTGCTG
CGGCGCTACA AGACGGTACG GCTGTTCCAG ACGACGATCC GCGGCGAACT CGGCACCGAG
ACTGAAGTCG AGGTCTCAGC CGTCGACGGC GAGGACGATC AATACATCGG CGTTCTGATG
CGCAATGTCG CGCGGCGCCT CGACGCTGCG GACGACCACG ATGCCTTGCG TCAGGCGCTC
GGCCCGATCA GCAAGCAGCT CGGGCGATCC TCGCTGCGCA AGCTGGTGAA GAACGCCGTG
AGCATTGTCG AGCAGCACTA CGTGAAGGAA GCGCTGTTGC GATCCAAGGG CAATCGCACG
GCAACTGCCG AACTGCTCGG ATTGAGCCGG CAGAGCCTTT ATGCAAAACT CAACCGCTAC
GGCTTCGACG ACAAAGGTGT CGTTGCTTCT GCTGCCGACA GTGCAGAGGG CGCCTCAGAC
GACGCAGAGG ATTGA
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| Protein sequence | MASKSVHADI TLLLDMEGVI REATLSPTMA AESVDGWLGR RWSDIAGAEG GDKVRRMVED
ARRSGISAFR QINQPFPSGV EIPIEFTTML LGDRTGMIAV GKNMQAVTEL HSRLIAAQQA
MERDYWRLRE LETRYRLVFD AAADAVMIVS AGDMRIVEAN RAAVNAISRV ERGNDDLAGR
DFLAEVAAAD RDVVRDMLAQ VRQRGTALSV LVHLGRYDRA WMLRGSLMSS ERRQVFLLHF
TPVTTTPAID DVDDDAVLRG LIDRIPDGFV ALDSEGVVRH ANQAFLDLVQ IGSKPAAVGR
SLGGWMGRPG ADLSSLLTLL RRYKTVRLFQ TTIRGELGTE TEVEVSAVDG EDDQYIGVLM
RNVARRLDAA DDHDALRQAL GPISKQLGRS SLRKLVKNAV SIVEQHYVKE ALLRSKGNRT
ATAELLGLSR QSLYAKLNRY GFDDKGVVAS AADSAEGASD DAED
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