Gene Rpal_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1708 
Symbol 
ID6409365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1831584 
End bp1832705 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content67% 
IMG OID642711596 
ProductO-methyltransferase family 2 
Protein accessionYP_001990711 
Protein GI192290106 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTCAT TGAGCCTGCG TGACCGGCTG CTCGGCTGGC GCGATTCGAT CTTGTCGAAT 
CCGCGCTTTC AGCGTTTTGC AGCGGTGTTT CCGTTGATGC GTCCGGTCGC GCGCCGGCGT
GCCGTGGCGA TGTTCGACCT TGTCGCCGGC TTCGTCTATT CACAGATCCT GCTGGCCTGC
GTGCAGCTCC GGCTGTTCGA CATTGTCGCT GAGCGCCCGG CCACCGCCGA AGACCTTGCG
GTGCGGCTGG GGCTGCCTGT GGACTCGTTG CGCGTGTTGC TCGATGGGGC GGTTGCGCTT
CGGCTGCTCC AGATGCGCAG CGGCCATCGC TACGGCCTCG GCCAGCTCGG CGCCGAACTG
CGCGGCAATC CGGGGGTGCT GGCGCTCGTG GCGCATCACG CCATGCTGTA TCGGGATCTT
GCCGATCCGG TGGCGCTGCT GCGCGCGCCG CGCGGTGGGG GGGAACTCGC CGCCTATTGG
GCGTATGTCC GGGGCGAGCG GCCCGGCGAG CTGCCGGCCG ATGCGATTGC CTCCTATACC
GCGCTGATGG CGGCGTCCCA GCCGATGATC GCCCGCGAGG TGCTGCACGT CTATTCGTTC
CGCGATCACC GCTGCCTGCT CGACGTCGGC GGCGGCGACG GCTCATTCCT GTCGGCGGTC
GCCGCGCAGG CGCCGCAGCT GCGCTGCATG CTGTTCGACC TGCCGGCGGT AGCCGAGAAG
GCGGCCGCCC GGTTCGAGGC GAACGGCCTG AAGGGCAGGG CGACCGCGGT CGGGGGCAGT
TTCACCACCG ACCCGCTGCC CCAAGGCGCC GACATCGTTT CGCTGGTCCG GGTGATCCAC
GACCACGACG ACGATGTCGT CGAAGCGCTG CTGCGCGCCG TCCACAAGGC TTTGCCCGAC
AACGGGAAAT TGCTGATCGC CGAGCCGATC GCCGGGCTTC CCGGGACGGC TGCGATCTCC
GACGCCTATT TCGCCTTTTA CCTTTACGCC ATGGGCTCCG GGAAAGCCCG GAGCTTCCCT
CGACTGCAGG CGATGTTGGA GAATGCGGGC TTCTCCCAGG TCACTTTGCA CCCGGTTCCC
ATGCCGCTGG TTGCTTCCGT AATTACCGCA TCCAAACGGT AG
 
Protein sequence
MVSLSLRDRL LGWRDSILSN PRFQRFAAVF PLMRPVARRR AVAMFDLVAG FVYSQILLAC 
VQLRLFDIVA ERPATAEDLA VRLGLPVDSL RVLLDGAVAL RLLQMRSGHR YGLGQLGAEL
RGNPGVLALV AHHAMLYRDL ADPVALLRAP RGGGELAAYW AYVRGERPGE LPADAIASYT
ALMAASQPMI AREVLHVYSF RDHRCLLDVG GGDGSFLSAV AAQAPQLRCM LFDLPAVAEK
AAARFEANGL KGRATAVGGS FTTDPLPQGA DIVSLVRVIH DHDDDVVEAL LRAVHKALPD
NGKLLIAEPI AGLPGTAAIS DAYFAFYLYA MGSGKARSFP RLQAMLENAG FSQVTLHPVP
MPLVASVITA SKR