| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1675 |
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| Symbol | |
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| ID | 6409332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1794302 |
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| End bp | 1795504 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711563 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001990678 |
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| Protein GI | 192290073 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.903252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTCG AAACGCGGAC ACAGAAACCG CTGGCCACCA CCGCTAACGC CAGGGCCCTC
GACGGGCTCC GCGTGCTCGA TTTCTCCACC ACCATCGCTG GCCCGCACTG CACCCGGATG
CTGTCCGACA TGGGCGCCGA GGTGATCAAG ATCGAAGCCG CCGACGGCGA CACCATGCGC
AACCGGCCGC CGGTACGTGA GGCCTGCAGC ACCGCGTTCG GCCAGCTCAA CGTCGGCAAA
AAGAGCATCG TGCTCGACCT GAAATCGCCC GACGGCCTCG AGGCAGTGCA GCGGCTGGTC
GCCGGCGCCG ATATCCTGGT CGAGAACTTC CGCCCCGGCG TGATGCAGCG GCTGCAGATG
GACTACGCGT CGCTGCGCGG CTTCAATCCC GAACTGATCT ACTGCTCGAT CTCCGGCTAC
GGCCAGACCG GGCCGTCGGC GGAACTGCCC GCCTATGCGC CTGCGATCCA TGCCGCGTCC
GGTTTCGACC TCGCGCACCT CGCCTATCAG CCAGGCCGCG ACCGCCCGGA CTACTGCGGC
ATCTATCTCG CCGACGTCGT CAGCGGGATC TACGCCTATG GGGCGATTAC CTCGGCGTTG
TATCAGCGCG TGCGCACAGG CGAGGGCCAG CACATCGACG TGTCGATGCT GGAAGCGATG
CTGACGCTGA CGTTGAACGA GATGCAGTGG TCGCAGTTTC CGGTGACGCT GCCGGGGCGG
CCGCAGTTCG GCCCTGTCGA AACCTCCGAC GGGTACGTGA TGATCGCCGT CGCCAGCGAG
AAATCGTTCC GCAGCTTCAT GCTGGCGGCC GAGCGCCCCG ACCTGATCAC CGATCCACGG
TTCGAGAAGT ACGCCGACCG CCGCCTCGCC TGGGGCGAAC TGATGGACAC CATCGAGACG
AGCTGGTCGC GCAAGCTGAC GTCGAAGCAG TGCCTTGCCG CGCTCGACAA ATTCGGCGTG
CCCTGCTCTG CCTATCGCAC CGTGGCCGAG GCAATGGCCG ATCCGCAGAC CGCGCACCGC
CAAGCGCTCG CAGAAGTGCA CGACGATGCC GGCAGCTTCA AGGTGCTCAA TCTGCCGTTC
CGGATGTCGG CGGCAAATCC GTCGCCGAAC CCGCGCGTGG CGCGGCTCGG CGAGCACACC
AAGGCGGTGC TGCAACAGGC CGGCTATTCG GACGAGGACA TCGCCCAGTT CGGCGCACGC
TGA
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| Protein sequence | MTVETRTQKP LATTANARAL DGLRVLDFST TIAGPHCTRM LSDMGAEVIK IEAADGDTMR
NRPPVREACS TAFGQLNVGK KSIVLDLKSP DGLEAVQRLV AGADILVENF RPGVMQRLQM
DYASLRGFNP ELIYCSISGY GQTGPSAELP AYAPAIHAAS GFDLAHLAYQ PGRDRPDYCG
IYLADVVSGI YAYGAITSAL YQRVRTGEGQ HIDVSMLEAM LTLTLNEMQW SQFPVTLPGR
PQFGPVETSD GYVMIAVASE KSFRSFMLAA ERPDLITDPR FEKYADRRLA WGELMDTIET
SWSRKLTSKQ CLAALDKFGV PCSAYRTVAE AMADPQTAHR QALAEVHDDA GSFKVLNLPF
RMSAANPSPN PRVARLGEHT KAVLQQAGYS DEDIAQFGAR
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