| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1598 |
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| Symbol | |
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| ID | 6409255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1709871 |
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| End bp | 1711115 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642711487 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_001990602 |
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| Protein GI | 192289997 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCATTT CCCGACGTTC ATTCGGAATC GGTGCGACTG GTCTGGTGCT CGGAACGGTC
GCAGCGCCTT GGGTTCGCAA CGCCAGCGCA GAGCCGGCCC CGATCAAAAT CGGCGTGATC
AATTCGATGA GCGGCGGTCT GTCGGCCTAC GCGCAGGAAG GCAAGCCGGC GTTCGATTAC
ATCATCGATC AGATCAACAA GAGCGGCGGC ATCAAGAGCA AGGACGGCGC CAAGATTCAG
TTGCTGCAGG CCGACGACGC CAGCCAGCCG GCGCGGACCG CCACCGAAGC GCGCCGCCTG
ATCACCGAAG AAAAGGTGCC GCTGCTGACC GGCACCATCC TCAGCGCACA GATGCTGGCG
CTGACGCCGG TGCTCGACGA ATTGAAGGTG CCGACTCTGT CGATCTGGGC TGGCGGCGCC
AGGTCGAGCT ACATGTTCTC GCTCGGTTAT CCGTATGACC GCGGCTACGC GCAATCGATG
CACGATTTCA TCGTGTCGCT GCGCGACAAC GATAAGTTCC CGATCAAGAC CGCGGTGATG
TGCTACTCGA ACTACGAGGC CGGCCAGCAG GTCAACAAGT TCCTGATCGA GAAGCTGAAG
GCCAGCGGCA TCGAGGTGAT CGGCGAAGCG CCGCTCGACA CCAAGGCGCA GGACCAGACC
TCGGCGATGA TCCGCATCCG CTCGCTGAAG CCGGACGTCG TCACCGGACT GGTGACACCG
CGCGACGGCA TTCTGATGCA TCAGGCGCGC TACAACCTCA ACTATCAGGG CAGCCTGTTC
GTCGGCGGCA CCGGCGGTTA TTCGGACCTG TCGCTGTGGA AGGATCTCGG CCCCGAGATC
GGCAAGGCGG TGCTGACGCG CAACCTGTTC GGCATGACCG GCTTCAGCGC CGGCGCCAAG
ATGGACTCAA TGCAGAAGAT CATCACCGAG CTGCGCGACG TTGCCAAGCT CGAGCGCATC
GGCCAGGGCG CGGTTCAGTA TGCCCAGGGC GCGCGCGTGC TGCAGCAGGT GCTTGAGAAC
GCCAAGTCGC TGGAGCCGGA CGCGCTGCTC GAGGCGTTCA AGAGTTTCAA GATCCCGTTC
GGCGATCCGC ATCTCTACAT CGCCAAGCCG AAGGGCCTGC AGTTCGCCGA GGACCGGCTG
CTGACCGACG GTTCAGCGAT GATGATCCAG TGGATGCCGG ATCAGAGCCA GGAGGTCGTG
TTCCCGAAGG AGTTCGCACA GGCAGCTCCG CGTCCCAAGA GCTGA
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| Protein sequence | MSISRRSFGI GATGLVLGTV AAPWVRNASA EPAPIKIGVI NSMSGGLSAY AQEGKPAFDY
IIDQINKSGG IKSKDGAKIQ LLQADDASQP ARTATEARRL ITEEKVPLLT GTILSAQMLA
LTPVLDELKV PTLSIWAGGA RSSYMFSLGY PYDRGYAQSM HDFIVSLRDN DKFPIKTAVM
CYSNYEAGQQ VNKFLIEKLK ASGIEVIGEA PLDTKAQDQT SAMIRIRSLK PDVVTGLVTP
RDGILMHQAR YNLNYQGSLF VGGTGGYSDL SLWKDLGPEI GKAVLTRNLF GMTGFSAGAK
MDSMQKIITE LRDVAKLERI GQGAVQYAQG ARVLQQVLEN AKSLEPDALL EAFKSFKIPF
GDPHLYIAKP KGLQFAEDRL LTDGSAMMIQ WMPDQSQEVV FPKEFAQAAP RPKS
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