| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1586 |
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| Symbol | |
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| ID | 6409243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1693816 |
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| End bp | 1694811 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642711475 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_001990590 |
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| Protein GI | 192289985 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.460298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAGA AATTCAAGCA GATTCGCGCG CGTCTACGAC TGCCAGTCCT GGTCGCGCCG
ATGCTGCGCA TATCAGGGCC GGCTTTGGTT GCAGCGAGCT GCAGTAACGG CGTCATCGGC
TCGTTTCCAA CGGTCAACGC CCGAACGCCC GACCAGCTCG ATCGATGGAT CGACGAGATC
AAGCAGGCCG TCTCGGCCGC TGGTGCCTAC GACGCGCCTT ACTGCGCAAA CATTCTGGCG
CGATCTGATC CGGACAAGCT GCAGGCCGAC CTCAAAATTT TGATCAAGCA CAAGGTCGAA
ATCGTCCTCG TCAGCACTGG CGCGCCTGAG AAATATGTAA AGCCGCTGCA GGATATCGGA
TGCTTTGTCA TCGCCGACGT CGCCTCGATC CGCCATGCGA GAAAGGCTCT GCAGCAAGGC
GTCGATGGTC TCGCTCTCTT GACGGCGGGC GCCGGCGGGC AGACCGGCTG GGCCAATGGC
TTCGCATTCG TTCGCGCGAT TCGCGATTTC TATGACGGTC CACTGTTGCT GGCTGGGGGC
GTCTCCGACG GTCAGGCGTT GTGGGCCGCA CGGACACTCG GCTGCGATCT CGGCCTGATG
GGGACGCGCT TCATCGGCAC GCAGGAGTGC GATGCATCCG ACGGTTACAA AGCGATGCTG
GTCGACAGCG GCATCGACGA TGTGGTGCTG ACGCGTGGCA TCAGTGGTAT CGACGCCAAC
TTCCTGCGCC CGTCGATCAT TGCCTTCGGT CTCGATCCGC AGGAATTGGC GGCCCCGGTG
TCACCCGAAC GCGCCCGTGA AATGTTCAGC AGCTACGCGG AGGGGATGCG CGGTCCGAAG
CGCTGGGTTG ATCTGTGGAG CGCTGGCCAT ACCGTCTCGG GCGTCAAGGC GGTCCAGAGC
GTGGCGGAGG TCGTGGATCA GTTGGCGGTG GAATATACCG GAGCCCAACG TGCGACCAGG
GCGCTGCTTG CCGATGCGGA CGATCCCGCC ATCTGA
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| Protein sequence | MSEKFKQIRA RLRLPVLVAP MLRISGPALV AASCSNGVIG SFPTVNARTP DQLDRWIDEI
KQAVSAAGAY DAPYCANILA RSDPDKLQAD LKILIKHKVE IVLVSTGAPE KYVKPLQDIG
CFVIADVASI RHARKALQQG VDGLALLTAG AGGQTGWANG FAFVRAIRDF YDGPLLLAGG
VSDGQALWAA RTLGCDLGLM GTRFIGTQEC DASDGYKAML VDSGIDDVVL TRGISGIDAN
FLRPSIIAFG LDPQELAAPV SPERAREMFS SYAEGMRGPK RWVDLWSAGH TVSGVKAVQS
VAEVVDQLAV EYTGAQRATR ALLADADDPA I
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