Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1553 |
Symbol | |
ID | 6409210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1645543 |
End bp | 1647183 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642711447 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001990562 |
Protein GI | 192289957 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCAGA CGGGCGACCT CGAAAGCTGG ACGGTCAACG ACGCGCTGAT CCGCCGGGCG ATGCGCGATC CCGACCGGCC GTTGCTGCGG TTCGTCGGCG GACGCGCCGA GAGCTGCGGC GAGACCTACG CGTCGGCGAC GCGGCTGGCG GCCGGACTGC AAGCGCTCGG AGTCGGGCCG GGCGATCGCG TCATCGCGAT GATGCACAAT CGGATCGAGG CGATCCATCT GTGGCTGGCG ACCAATCTGG TCGGCGCGGT CGACGTTGCC ATCAACGCCG GCTATCGCGG CGCGCCGCTG GTCCACGCCA TCGAGCAGAC CGGACCGAAG GTGATCGTGA TCGAGGCCGG GCTCGTGCCG GCGCTGGCTG CCGTCGCGGC CGAGCTCCGG GCGCCGGCGA TCGTCGTCGT GATCGACGAG GCGCCCCGGA ACGATCTGCC GCTGGCGTTC AGGACGACGT CGTTCGCCTC GCTGTGCGAA GGCGCGGCCC TGGATGCGCC CGCCGCGCTG CGGCGCTCGG ACACCGCCTC GATCATCTTC ACCTCCGGGA CCACCGGGCC TGCCAAGGGC GTGGTGATGC CGCACGGGCA GGTGATGCTG ATCGCGCATC GCACCGCGCA TCATTGCCGG CTGTCACAGC AGTCGGTCTG GTACAGCTTT CACCCGCTGT ATCACATGGC CGGAAAATTC ATGGCTGTGC TCGGATCGCT GGTCGCAGGC GGCGAAGTGG TGATCGACAC CGCGTTCGAG CCGGCCGCGT GGATTTCGCG CGCGCGCCAT TTCGGTGCGA CGATTTCCGG CGGTCACGGG CCGATGCTGG AGATGATCTT CGCGACGCCG CCGCGCGACG ACGATCGCAA CCACAGTCTC GAGACCGTCT GCTCAGCGCC GTTCCCGCAC CACATCGCGC GTGATTTTGA AGCGCGGTTC GGCGTCAGAG GTCTTGAGGT ATGGGGCATG ACCGAGGTCG GTCTGCCGCT GTGGAACGAC ATCGCGGCAC CGCTGCGCGA AGGGTCCTGC GGGCGTCTCG ATGCTGAATG GTTCGAGTTC GCGGTGGTCG ATCCGGAGAG CGACACGCCG GTCGCGCTCG GTGTCGTCGG CGAGTTCGTG GTGCGGCCGA AGGCGCCGTG GACGATCATG CAGGGCTACG ACGCCATGCC GGACAAGACC GTCGAGGCGT GGCGCAATCT TTGGTTCCAT ACCGGCGATC TCGGCCATCT CGACCGCGAC GGCTACGTGT ACTTCGCCGA GCGCGCTTCC GAGCGGATCC GCCGCCGTGC CGAGAACGTC TCGGCGCACG ACATCGAGAT CGCGATCAGC CGGCATCCCG CAGTGCGCGA GGCCGCGGCG ATCGGCGTGC CCTCGGAGTT CGCCGGCGAC GACGACATCG AGCTCTGCCT GGTGCTGAGC CCGGGCAGCG AGGTCGTGCC GCACGATCTC CTCGCCTATC TCGCCAGTGC TCTGCCGCAC TACATAGTGC CACGCTATCT GCGCTTCATG GACGAACTGC CGCGCAGCGT CACCAACAAG ATTCAACGCA CCCATTTGAA ACAATCGAGC GGCGGCGCGC AGCGCTGGGA CCGCAAGGCC CACGGCATCG TGCTGCGCGA TCTGATCGGC CGGGAGAACG GACATGACTG A
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Protein sequence | MTQTGDLESW TVNDALIRRA MRDPDRPLLR FVGGRAESCG ETYASATRLA AGLQALGVGP GDRVIAMMHN RIEAIHLWLA TNLVGAVDVA INAGYRGAPL VHAIEQTGPK VIVIEAGLVP ALAAVAAELR APAIVVVIDE APRNDLPLAF RTTSFASLCE GAALDAPAAL RRSDTASIIF TSGTTGPAKG VVMPHGQVML IAHRTAHHCR LSQQSVWYSF HPLYHMAGKF MAVLGSLVAG GEVVIDTAFE PAAWISRARH FGATISGGHG PMLEMIFATP PRDDDRNHSL ETVCSAPFPH HIARDFEARF GVRGLEVWGM TEVGLPLWND IAAPLREGSC GRLDAEWFEF AVVDPESDTP VALGVVGEFV VRPKAPWTIM QGYDAMPDKT VEAWRNLWFH TGDLGHLDRD GYVYFAERAS ERIRRRAENV SAHDIEIAIS RHPAVREAAA IGVPSEFAGD DDIELCLVLS PGSEVVPHDL LAYLASALPH YIVPRYLRFM DELPRSVTNK IQRTHLKQSS GGAQRWDRKA HGIVLRDLIG RENGHD
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