| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1549 |
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| Symbol | |
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| ID | 6409206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1641010 |
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| End bp | 1642047 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642711443 |
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| Product | glycosyl hydrolase family 88 |
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| Protein accession | YP_001990558 |
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| Protein GI | 192289953 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.672229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGCTCA CGACGCTGGT ACAGCGGGTC ACGCAATTCG CGTTGGCCCA TCACGATCCA
CGCGACTGCT GGATCAAGGC TACGGCGATC TCCGGGGTTC TCGCTTGGGA CGAGCCGGAG
GCGGTGCGGG CGGTCGAGGG CTGGATGCGC GGCGCGATCG CGACGCAGCG CTCCAACGGT
CATCTCAATT ACGCGGACGC GGTACAGGCG ATCGGTGCCG GCCACATCCG GTCGTTCACG
CCGACGGCGG CGCTGCCGGC GAGCCTCGGC TTTCCGCTGA TGCAGCTTTA TCTACGCACC
GGCGACGCCG GTTTTCTCGA CGCGGCGCAG CGCCAGATGC AGGCGCTGCT CGACAGCCCG
CGCACCTCGG ATGGCGGCAT CTGGGCGCGT GCCGAAGGTC CCGAATTGTG GATCGATTTC
GTTCACCTGA TGACGCCGTT CATGGCGCTG TACGGGAAGA CCGTCGGCGC CGCCGCGGTG
GTCGATGAAG CCTTCCGTCA GTATCGCGTG CATGTCGGGC ATCTGGTCGA TCCGGCGAAG
AAGCTGGCGC GGCATGCATG GTGCGAGCGG CCGGACCATT TTCCGCAATC GACCTTCTGG
TCGCGCGGCA ACGGCTGGCT GGTGTGCGCG TCGATCGAGC TGCTGCAGAT CGCGCCGGAT
CACGCCGAGG CGGGTTTCGT GGCCGAGACC TGCGCCGCGG CGCTCCAGGC GATCGCGCGC
CATCAGGATG CGTCGGGATT TCTGTGCCAC GTGCTCGACG ATCCTCGCTC AAACCTCGAA
GCCTCGGGCA CGTTGATGTT CGCCTATGCG GCGACCCGGT CGATAACGCT CGGGATCTCG
CCCGCCGCGC TGCAAGCCGC GGCTGACGGA GCGTTTCTCG CAGTAACGCG GACGGTGGAG
CAGAGCGGCA AGGTGCCGGG CGTCGCGGTG CCGCCCGGCG GTCCCGGCGT GCCGTTCGAA
TGGACGCAGT TCGGCCAGGG CTTCTTCCTG CTCGCCGCCA AGGCCCTCGA GACCCGCTTC
AAGGAGATCG CAGCGTGA
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| Protein sequence | MELTTLVQRV TQFALAHHDP RDCWIKATAI SGVLAWDEPE AVRAVEGWMR GAIATQRSNG
HLNYADAVQA IGAGHIRSFT PTAALPASLG FPLMQLYLRT GDAGFLDAAQ RQMQALLDSP
RTSDGGIWAR AEGPELWIDF VHLMTPFMAL YGKTVGAAAV VDEAFRQYRV HVGHLVDPAK
KLARHAWCER PDHFPQSTFW SRGNGWLVCA SIELLQIAPD HAEAGFVAET CAAALQAIAR
HQDASGFLCH VLDDPRSNLE ASGTLMFAYA ATRSITLGIS PAALQAAADG AFLAVTRTVE
QSGKVPGVAV PPGGPGVPFE WTQFGQGFFL LAAKALETRF KEIAA
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